RNA–Protein interactions for RNA: ENST00000393780.3

GAP43-202, Transcript of growth associated protein 43, humanhuman

TSL 1 (best) BASIC

Gene GAP43, Length 1,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43-202ENST00000393780 ZNF562Q6V9R5 426 aa11.02□□□□□ -0.65
GAP43-202ENST00000393780 NEU4Q8WWR8 484 aaPredicted RBP11.02□□□□□ -0.65
GAP43-202ENST00000393780 TMUB1Q9BVT8 246 aa11.02□□□□□ -0.65
GAP43-202ENST00000393780 MS4A6AQ9H2W1 248 aa11.02□□□□□ -0.65
GAP43-202ENST00000393780 AAMDCQ9H7C9 122 aa11.02□□□□□ -0.65
GAP43-202ENST00000393780 APC2O95996 2303 aa11.02□□□□□ -0.65
GAP43-202ENST00000393780 FAM90A27PA6NNH2 459 aa11.01□□□□□ -0.65
GAP43-202ENST00000393780 ARF6P62330 175 aa11.01□□□□□ -0.65
GAP43-202ENST00000393780 HILPDAQ9Y5L2 63 aa11.01□□□□□ -0.65
GAP43-202ENST00000393780 ASPMQ8IZT6 3477 aa11.01□□□□□ -0.65
GAP43-202ENST00000393780 F8W735 103 aaPredicted RBP11.01□□□□□ -0.65
GAP43-202ENST00000393780 CT45A10P0DMU9 189 aa11.01□□□□□ -0.65
GAP43-202ENST00000393780 CSN1S1P47710 185 aa11.01□□□□□ -0.65
GAP43-202ENST00000393780 LINC01545Q5VT33 79 aa11.01□□□□□ -0.65
GAP43-202ENST00000393780 C1orf122Q6ZSJ8 110 aa11.01□□□□□ -0.65
GAP43-202ENST00000393780 Q8N6K4 173 aa11.01□□□□□ -0.65
GAP43-202ENST00000393780 ARPC1AQ92747 370 aa11.01□□□□□ -0.65
GAP43-202ENST00000393780 COX11Q9Y6N1 276 aa11.01□□□□□ -0.65
GAP43-202ENST00000393780 U3KQK5 164 aa11.01□□□□□ -0.65
GAP43-202ENST00000393780 LOC105371242A0A075B767 164 aa11□□□□□ -0.65
GAP43-202ENST00000393780 HSBP1L1C9JCN9 74 aa11□□□□□ -0.65
GAP43-202ENST00000393780 EBI3Q14213 229 aa11□□□□□ -0.65
GAP43-202ENST00000393780 CCDC144NLQ6NUI1 221 aa11□□□□□ -0.65
GAP43-202ENST00000393780 AP5S1Q9NUS5 200 aa11□□□□□ -0.65
GAP43-202ENST00000393780 C21orf62Q9NYP8 219 aa11□□□□□ -0.65
GAP43-202ENST00000393780 BSNQ9UPA5 3926 aa11□□□□□ -0.65
GAP43-202ENST00000393780 C11orf71Q6IPW1 123 aa10.99□□□□□ -0.65
GAP43-202ENST00000393780 SCRT2Q9NQ03 307 aa10.99□□□□□ -0.65
GAP43-202ENST00000393780 THYN1Q9P016 225 aa10.99□□□□□ -0.65
GAP43-202ENST00000393780 MAP1BP46821 2468 aaKnown RBP10.99□□□□□ -0.65
GAP43-202ENST00000393780 M0R3E3 92 aa10.99□□□□□ -0.65
GAP43-202ENST00000393780 SCGB2A1O75556 95 aa10.99□□□□□ -0.65
GAP43-202ENST00000393780 RPL7P18124 248 aaKnown RBP10.99□□□□□ -0.65
GAP43-202ENST00000393780 GRNP28799 593 aaKnown RBP10.99□□□□□ -0.65
GAP43-202ENST00000393780 ZNF138P52744 262 aa10.99□□□□□ -0.65
GAP43-202ENST00000393780 KLRD1Q13241 179 aa10.99□□□□□ -0.65
GAP43-202ENST00000393780 KLF17Q5JT82 389 aaPredicted RBP10.99□□□□□ -0.65
GAP43-202ENST00000393780 SAPCD1Q5SSQ6 148 aa10.99□□□□□ -0.65
GAP43-202ENST00000393780 SLC25A34Q6PIV7 304 aa10.99□□□□□ -0.65
GAP43-202ENST00000393780 ZNF738Q8NE65 137 aa10.99□□□□□ -0.65
GAP43-202ENST00000393780 C8orf49Q96NF6 230 aa10.99□□□□□ -0.65
GAP43-202ENST00000393780 ABCA1O95477 2261 aa10.99□□□□□ -0.65
GAP43-202ENST00000393780 hDV102S1A0JD36 115 aa10.98□□□□□ -0.65
GAP43-202ENST00000393780 TMEM189A5PLL7 270 aa10.98□□□□□ -0.65
GAP43-202ENST00000393780 S100A7P31151 101 aa10.98□□□□□ -0.65
GAP43-202ENST00000393780 RPS20P60866 119 aaKnown RBP10.98□□□□□ -0.65
GAP43-202ENST00000393780 SRSF2Q01130 221 aaKnown RBP10.98□□□□□ -0.65
GAP43-202ENST00000393780 HES1Q14469 280 aa10.98□□□□□ -0.65
GAP43-202ENST00000393780 MINOS1Q5TGZ0 78 aa10.98□□□□□ -0.65
GAP43-202ENST00000393780 FA2HQ7L5A8 372 aa10.98□□□□□ -0.65
GAP43-202ENST00000393780 OR10AG1Q8NH19 301 aa10.98□□□□□ -0.65
GAP43-202ENST00000393780 ZNF747Q9BV97 191 aa10.98□□□□□ -0.65
GAP43-202ENST00000393780 MINOS1-NBL1R4GNA1 71 aa10.98□□□□□ -0.65
GAP43-202ENST00000393780 FOXC1Q12948 553 aa10.97□□□□□ -0.65
GAP43-202ENST00000393780 UNQ5815/PRO19632Q6UWF5 114 aa10.97□□□□□ -0.65
GAP43-202ENST00000393780 SH2D1AO60880 128 aa10.97□□□□□ -0.65
GAP43-202ENST00000393780 NDPQ00604 133 aa10.97□□□□□ -0.65
GAP43-202ENST00000393780 UBE2V1Q13404 147 aa10.97□□□□□ -0.65
GAP43-202ENST00000393780 KLK9Q2XQG4 91 aa10.97□□□□□ -0.65
GAP43-202ENST00000393780 FBLN7Q53RD9 439 aa10.97□□□□□ -0.65
GAP43-202ENST00000393780 BCL6BQ8N143 479 aaPredicted RBP10.97□□□□□ -0.65
GAP43-202ENST00000393780 PRSS3P2Q8NHM4 247 aa10.97□□□□□ -0.65
GAP43-202ENST00000393780 DPF1Q92782 380 aa10.97□□□□□ -0.65
GAP43-202ENST00000393780 PMCHL2Q9BQD1 86 aa10.97□□□□□ -0.65
GAP43-202ENST00000393780 KLK9Q9UKQ9 250 aa10.97□□□□□ -0.65
GAP43-202ENST00000393780 CCL21O00585 134 aa10.96□□□□□ -0.65
GAP43-202ENST00000393780 TCF21O43680 179 aa10.96□□□□□ -0.65
GAP43-202ENST00000393780 CSN3P07498 182 aa10.96□□□□□ -0.65
GAP43-202ENST00000393780 FAM104BQ5XKR9 115 aa10.96□□□□□ -0.65
GAP43-202ENST00000393780 LYZL1Q6UWQ5 148 aa10.96□□□□□ -0.65
GAP43-202ENST00000393780 VMO1Q7Z5L0 202 aa10.96□□□□□ -0.65
GAP43-202ENST00000393780 ASCL2Q99929 193 aa10.96□□□□□ -0.65
GAP43-202ENST00000393780 PRR25Q96S07 402 aa10.96□□□□□ -0.66
GAP43-202ENST00000393780 RABAC1Q9UI14 185 aa10.96□□□□□ -0.66
GAP43-202ENST00000393780 S4R3C0 116 aa10.96□□□□□ -0.66
GAP43-202ENST00000393780 RIF1Q5UIP0 2472 aaKnown RBP10.95□□□□□ -0.66
GAP43-202ENST00000393780 LY6HO94772 140 aa10.95□□□□□ -0.66
GAP43-202ENST00000393780 C12orf54Q6X4T0 127 aa10.95□□□□□ -0.66
GAP43-202ENST00000393780 SMG1Q96Q15 3661 aaKnown RBP10.95□□□□□ -0.66
GAP43-202ENST00000393780 CTSGP08311 255 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 BMI1P35226 326 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 PTTG1IPP53801 180 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 ADORA2A-AS1P86434 159 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 BVES-AS1Q5T3Y7 98 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 ORMDL3Q8N138 153 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 DYNAPQ8N1N2 210 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 NPFFR1Q9GZQ6 430 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 A0A096LNJ9 63 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 D6R8Y8 96 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 CCL25O15444 150 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 COX8AP10176 69 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 EGR2P11161 476 aaPredicted RBP10.94□□□□□ -0.66
GAP43-202ENST00000393780 HIST1H1AQ02539 215 aaPredicted RBP10.94□□□□□ -0.66
GAP43-202ENST00000393780 RELQ04864 619 aaPredicted RBP10.94□□□□□ -0.66
GAP43-202ENST00000393780 MPV17L2Q567V2 206 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 PRELID3AQ96N28 172 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 TPPP3Q9BW30 176 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 SIGLEC8Q9NYZ4 499 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 SMAD5-AS1Q9Y6J3 95 aa10.94□□□□□ -0.66
GAP43-202ENST00000393780 IGKV2-40A0A087WW87 121 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms