RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 POPDC3Q9HBV1 291 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 BIN3Q9NQY0 253 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 NAT8BQ9UHF3 227 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 PKIGQ9Y2B9 76 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 SVEP1Q4LDE5 3571 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 EVC2Q86UK5 1308 aa-0.64□□□□□ -2.51
SNORD28-201ENST00000384706 GVINP1Q7Z2Y8 2422 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 SETD2Q9BYW2 2564 aaPredicted RBP-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 FAT1Q14517 4588 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 NUP98P52948 1817 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 MXRA5Q9NR99 2828 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 DUXBA0A1W2PPF3 345 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 hDV103S1A0JD37 113 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 MCRIP1C9JLW8 97 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 TGOLN2O43493 480 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 IGHV3-30P01768 117 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 SMIM17P0DL12 118 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 IGHV3-30-5P0DP03 117 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 HIST1H1TP22492 207 aaPredicted RBP-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 RPS12P25398 132 aaKnown RBP-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 SULT1A1P50225 295 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 BLVRAP53004 296 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 AP3S2P59780 193 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 SNRPD3P62318 126 aaKnown RBP-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 AESQ08117 197 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 MIR22HGQ0VDD5 57 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 TMED1Q13445 227 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 KRR1Q13601 381 aaKnown RBP-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 HIST2H3PS2Q5TEC6 136 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 Q5VSD8 79 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 SFXN4Q6P4A7 337 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 C22orf39Q6P5X5 142 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 LRRN1Q6UXK5 716 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 COPS6Q7L5N1 327 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 C20orf196Q8IYI0 205 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 Q8IZM0 81 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 OR5D16Q8NGK9 328 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 STAG3L4Q8TBR4 150 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 CHCHD1Q96BP2 118 aaKnown RBP-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 ISOC1Q96CN7 298 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 ZHX1-C8orf76Q96EF9 292 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 HYLS1Q96M11 299 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 AP1S3Q96PC3 154 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 PPP1R2P1Q96PQ5 205 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 OR52E6Q96RD3 313 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 BPESC1Q9GZL8 116 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 C20orf27Q9GZN8 174 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 CYP4F30PQ9H0H9 118 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 TMEM133Q9H2Q1 129 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 RABL2AQ9UBK7 228 aaPredicted RBP-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 PRO0255Q9UI72 69 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 CDK13Q14004 1512 aaKnown RBP-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 NCOA1Q15788 1441 aa-0.65□□□□□ -2.51
SNORD28-201ENST00000384706 URB1O60287 2271 aaKnown RBP-0.66□□□□□ -2.51
SNORD28-201ENST00000384706 ABCC11Q96J66 1382 aa-0.66□□□□□ -2.51
SNORD28-201ENST00000384706 ROBO3Q96MS0 1386 aa-0.66□□□□□ -2.51
SNORD28-201ENST00000384706 TRAV26-2A0A0B4J265 109 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 A0A0G2JMM0 328 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 LOC100506127A0A0U1RQW1 187 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 A0A1W2PPB8 328 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 TMEM213A2RRL7 107 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 OR4C46A6NHA9 309 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 FAM159BA6NKW6 160 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 KIR3DP1A8MWS1 328 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 LOC730098B7Z3J9 87 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 J3QRK9 145 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 GYPBP06028 91 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 OR5G3P0C626 314 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 SPRR1AP35321 89 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 DEFA3P59666 94 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 PSME3P61289 254 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 RANP62826 216 aaKnown RBP-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 MLLT11Q13015 90 aaPredicted RBP-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 PMS2P3Q13401 168 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 Q3ZCU0 254 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 BCL2L15Q5TBC7 163 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 Q5XG85 94 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 EIF5AL1Q6IS14 154 aaKnown RBP-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 TMEM86BQ8N661 226 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 OR4K15Q8NH41 348 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 CCL4L1Q8NHW4 92 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 GRPEL2Q8TAA5 225 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 PIGXQ8TBF5 258 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 SLC35B4Q969S0 331 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 ARL5BQ96KC2 179 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 C2orf50Q96LR7 162 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 ZNF714Q96N38 554 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 YPEL2Q96QA6 119 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 NPCDR1Q9BY65 106 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 RNF122Q9H9V4 155 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 MRPL35Q9NZE8 188 aaKnown RBP-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 TGP01266 2768 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 WRNQ14191 1432 aaPredicted RBP eCLIP-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 RREB1Q92766 1687 aa-0.66□□□□□ -2.52
SNORD28-201ENST00000384706 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 ANK1P16157 1881 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 EPG5Q9HCE0 2579 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 HELZP42694 1942 aaKnown RBP-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 DOCK11Q5JSL3 2073 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms