RNA–Protein interactions for RNA: ENST00000368460.7

PBXIP1-201, Transcript of PBX homeobox interacting protein 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PBXIP1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-201ENST00000368460 RABL2BQ9UNT1 228 aa12.78□□□□□ -0.36
PBXIP1-201ENST00000368460 ANKRD20A5PA0PJZ0 165 aa12.77□□□□□ -0.37
PBXIP1-201ENST00000368460 CTDSP2O14595 271 aa12.77□□□□□ -0.37
PBXIP1-201ENST00000368460 CTDSPLO15194 276 aa12.77□□□□□ -0.37
PBXIP1-201ENST00000368460 SYNGR2O43760 224 aa12.77□□□□□ -0.37
PBXIP1-201ENST00000368460 PITX3O75364 302 aa12.77□□□□□ -0.37
PBXIP1-201ENST00000368460 HYPMO75409 117 aa12.77□□□□□ -0.37
PBXIP1-201ENST00000368460 PRB4P10163 310 aaPredicted RBP12.77□□□□□ -0.37
PBXIP1-201ENST00000368460 CYP2G1PQ6ZSU1 146 aa12.77□□□□□ -0.37
PBXIP1-201ENST00000368460 ACOT7LQ6ZUV0 252 aa12.77□□□□□ -0.37
PBXIP1-201ENST00000368460 STRAPQ9Y3F4 350 aaKnown RBP12.77□□□□□ -0.37
PBXIP1-201ENST00000368460 H3BP45 60 aa12.76□□□□□ -0.37
PBXIP1-201ENST00000368460 ANXA7P20073 488 aaKnown RBP12.76□□□□□ -0.37
PBXIP1-201ENST00000368460 VAMP1P23763 118 aa12.76□□□□□ -0.37
PBXIP1-201ENST00000368460 LINC00315P59091 139 aa12.76□□□□□ -0.37
PBXIP1-201ENST00000368460 CCDC190Q86UF4 302 aa12.76□□□□□ -0.37
PBXIP1-201ENST00000368460 FRZBQ92765 325 aa12.76□□□□□ -0.37
PBXIP1-201ENST00000368460 C20orf144Q9BQM9 153 aa12.76□□□□□ -0.37
PBXIP1-201ENST00000368460 PGPEP1Q9NXJ5 209 aa12.76□□□□□ -0.37
PBXIP1-201ENST00000368460 RNF24Q9Y225 148 aa12.76□□□□□ -0.37
PBXIP1-201ENST00000368460 APOBP04114 4563 aaKnown RBP12.76□□□□□ -0.37
PBXIP1-201ENST00000368460 LINC00869P0C866 280 aa12.75□□□□□ -0.37
PBXIP1-201ENST00000368460 SLC25A6P12236 298 aa12.75□□□□□ -0.37
PBXIP1-201ENST00000368460 ERVFC1-1P60608 527 aa12.75□□□□□ -0.37
PBXIP1-201ENST00000368460 A0A087X0K7 114 aa12.74□□□□□ -0.37
PBXIP1-201ENST00000368460 PRSS46E5RG02 174 aa12.74□□□□□ -0.37
PBXIP1-201ENST00000368460 H3BNG1 76 aa12.74□□□□□ -0.37
PBXIP1-201ENST00000368460 HOXA5P20719 270 aa12.74□□□□□ -0.37
PBXIP1-201ENST00000368460 FAUP35544 74 aaKnown RBP12.74□□□□□ -0.37
PBXIP1-201ENST00000368460 SELENOTP62341 195 aa12.73□□□□□ -0.37
PBXIP1-201ENST00000368460 TMEM128Q5BJH2 165 aa12.73□□□□□ -0.37
PBXIP1-201ENST00000368460 RSL24D1Q9UHA3 163 aaKnown RBP12.73□□□□□ -0.37
PBXIP1-201ENST00000368460 DNAH5Q8TE73 4624 aa12.73□□□□□ -0.37
PBXIP1-201ENST00000368460 J3KRW8 73 aa12.72□□□□□ -0.37
PBXIP1-201ENST00000368460 IFNA5P01569 189 aa12.72□□□□□ -0.37
PBXIP1-201ENST00000368460 HOXB5P09067 269 aa12.72□□□□□ -0.37
PBXIP1-201ENST00000368460 Q5VSD8 79 aa12.72□□□□□ -0.37
PBXIP1-201ENST00000368460 CDPF1Q6NVV7 123 aa12.72□□□□□ -0.37
PBXIP1-201ENST00000368460 LCN15Q6UWW0 184 aa12.72□□□□□ -0.37
PBXIP1-201ENST00000368460 LYPD1Q8N2G4 141 aa12.72□□□□□ -0.37
PBXIP1-201ENST00000368460 LINC00612Q8N6U2 182 aa12.72□□□□□ -0.37
PBXIP1-201ENST00000368460 ARL6Q9H0F7 186 aa12.72□□□□□ -0.37
PBXIP1-201ENST00000368460 TRGV2A0A075B6R0 118 aa12.71□□□□□ -0.37
PBXIP1-201ENST00000368460 PMS2P5A8MQ11 134 aa12.71□□□□□ -0.37
PBXIP1-201ENST00000368460 SIVA1O15304 175 aa12.71□□□□□ -0.37
PBXIP1-201ENST00000368460 CXCL2P19875 107 aa12.71□□□□□ -0.37
PBXIP1-201ENST00000368460 GFI1BQ5VTD9 330 aa12.71□□□□□ -0.37
PBXIP1-201ENST00000368460 SLC50A1Q9BRV3 221 aa12.71□□□□□ -0.37
PBXIP1-201ENST00000368460 PARD6GQ9BYG4 376 aaPredicted RBP12.71□□□□□ -0.37
PBXIP1-201ENST00000368460 TMPRSS5Q9H3S3 457 aa12.71□□□□□ -0.37
PBXIP1-201ENST00000368460 FUSP35637 526 aaKnown RBP eCLIP12.7□□□□□ -0.38
PBXIP1-201ENST00000368460 KIR3DS1Q14943 382 aa12.7□□□□□ -0.38
PBXIP1-201ENST00000368460 LRTM2Q8N967 370 aa12.7□□□□□ -0.38
PBXIP1-201ENST00000368460 ARV1Q9H2C2 271 aa12.7□□□□□ -0.38
PBXIP1-201ENST00000368460 SNRPCP09234 159 aaKnown RBP12.69□□□□□ -0.38
PBXIP1-201ENST00000368460 PLP1P60201 277 aa12.69□□□□□ -0.38
PBXIP1-201ENST00000368460 RRAS2P62070 204 aaPredicted RBP12.69□□□□□ -0.38
PBXIP1-201ENST00000368460 PSENENQ9NZ42 101 aa12.69□□□□□ -0.38
PBXIP1-201ENST00000368460 A0A096LPF7 62 aa12.68□□□□□ -0.38
PBXIP1-201ENST00000368460 TRAV12-3A0A0B4J271 114 aa12.68□□□□□ -0.38
PBXIP1-201ENST00000368460 LEPP41159 167 aa12.68□□□□□ -0.38
PBXIP1-201ENST00000368460 Q6ZTI0 123 aa12.68□□□□□ -0.38
PBXIP1-201ENST00000368460 ZNF331Q9NQX6 463 aaPredicted RBP12.68□□□□□ -0.38
PBXIP1-201ENST00000368460 MGAT4CQ9UBM8 478 aa12.68□□□□□ -0.38
PBXIP1-201ENST00000368460 HERC1Q15751 4861 aa12.68□□□□□ -0.38
PBXIP1-201ENST00000368460 GOSR2O14653 212 aa12.67□□□□□ -0.38
PBXIP1-201ENST00000368460 SFT2D2O95562 160 aa12.67□□□□□ -0.38
PBXIP1-201ENST00000368460 AP3S2P59780 193 aa12.67□□□□□ -0.38
PBXIP1-201ENST00000368460 SPCS2Q15005 226 aa12.67□□□□□ -0.38
PBXIP1-201ENST00000368460 Q6ZRN7 208 aaPredicted RBP12.67□□□□□ -0.38
PBXIP1-201ENST00000368460 NFE4Q86UQ8 179 aa12.67□□□□□ -0.38
PBXIP1-201ENST00000368460 BPIFA4PQ86YQ2 179 aa12.67□□□□□ -0.38
PBXIP1-201ENST00000368460 PYGO2Q9BRQ0 406 aa12.67□□□□□ -0.38
PBXIP1-201ENST00000368460 FABP12A6NFH5 140 aa12.66□□□□□ -0.38
PBXIP1-201ENST00000368460 NXPH4O95158 308 aa12.66□□□□□ -0.38
PBXIP1-201ENST00000368460 XGP55808 180 aa12.66□□□□□ -0.38
PBXIP1-201ENST00000368460 POLR2GP62487 172 aaKnown RBP eCLIP12.66□□□□□ -0.38
PBXIP1-201ENST00000368460 DAZ2Q13117 558 aaKnown RBP12.66□□□□□ -0.38
PBXIP1-201ENST00000368460 PXDC1Q5TGL8 231 aa12.66□□□□□ -0.38
PBXIP1-201ENST00000368460 LINC00305Q7Z4B0 112 aa12.66□□□□□ -0.38
PBXIP1-201ENST00000368460 MCFD2Q8NI22 146 aa12.66□□□□□ -0.38
PBXIP1-201ENST00000368460 NPVFQ9HCQ7 196 aa12.66□□□□□ -0.38
PBXIP1-201ENST00000368460 CCDC59Q9P031 241 aaKnown RBP12.66□□□□□ -0.38
PBXIP1-201ENST00000368460 ICOSQ9Y6W8 199 aa12.66□□□□□ -0.38
PBXIP1-201ENST00000368460 TRGV1A0A0A0MS02 117 aa12.65□□□□□ -0.38
PBXIP1-201ENST00000368460 H3BTX0 84 aa12.65□□□□□ -0.38
PBXIP1-201ENST00000368460 SSSCA1O60232 199 aa12.65□□□□□ -0.38
PBXIP1-201ENST00000368460 COX7A2P2O60397 106 aa12.65□□□□□ -0.38
PBXIP1-201ENST00000368460 SLC38A11Q08AI6 406 aa12.65□□□□□ -0.38
PBXIP1-201ENST00000368460 PPP1R1AQ13522 171 aa12.65□□□□□ -0.38
PBXIP1-201ENST00000368460 TEPPQ6URK8 271 aa12.65□□□□□ -0.38
PBXIP1-201ENST00000368460 TOMM5Q8N4H5 51 aa12.65□□□□□ -0.38
PBXIP1-201ENST00000368460 ZNF680Q8NEM1 530 aa12.65□□□□□ -0.38
PBXIP1-201ENST00000368460 VSIG2Q96IQ7 327 aa12.65□□□□□ -0.38
PBXIP1-201ENST00000368460 PXMP4Q9Y6I8 212 aa12.65□□□□□ -0.38
PBXIP1-201ENST00000368460 PRAC2D3DTV9 90 aa12.64□□□□□ -0.39
PBXIP1-201ENST00000368460 MRPS12O15235 138 aaKnown RBP12.64□□□□□ -0.39
PBXIP1-201ENST00000368460 PAX4O43316 350 aa12.64□□□□□ -0.39
PBXIP1-201ENST00000368460 PATE2Q6UY27 113 aa12.64□□□□□ -0.39
PBXIP1-201ENST00000368460 ZNF546Q86UE3 836 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms