RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ESPL1Q14674 2120 aa13□□□□□ -0.33
COL18A1-203ENST00000359759 TINCRA0A1B0GVN0 87 aa13□□□□□ -0.33
COL18A1-203ENST00000359759 RUSC1-AS1Q66K80 236 aa13□□□□□ -0.33
COL18A1-203ENST00000359759 SPINK13Q1W4C9 94 aa13□□□□□ -0.33
COL18A1-203ENST00000359759 ARID2Q68CP9 1835 aa13□□□□□ -0.33
COL18A1-203ENST00000359759 TCTEX1D4Q5JR98 221 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 NKAPP1Q8N9T2 125 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 VWCEQ96DN2 955 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 SRSF8Q9BRL6 282 aaKnown RBP12.99□□□□□ -0.33
COL18A1-203ENST00000359759 LY96Q9Y6Y9 160 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 K7ERJ3 54 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 FGF6P10767 208 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 TMEM105Q8N8V8 129 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 IGLV3-32A0A0A0MS00 114 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 A8MWP6 167 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 OVOL3O00110 214 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 NPSP0C0P6 89 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 C9orf118A6NHY6 69 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 FAM223BA6NKX1 122 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 CEACAM8P31997 349 aaPredicted RBP12.99□□□□□ -0.33
COL18A1-203ENST00000359759 FAM223AQ8IWN6 122 aa12.99□□□□□ -0.33
COL18A1-203ENST00000359759 LOC102723996A0A087X1L8 192 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 RNASE2P10153 161 aaKnown RBP12.98□□□□□ -0.33
COL18A1-203ENST00000359759 COL8A2P25067 703 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 MST1P26927 711 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 Q6P435 159 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 KLHDC3Q9BQ90 382 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 IGLV3-12A0A075B6K2 115 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 IGHG3P01860 377 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 C20orf204Q6ZNR8 217 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 SCRT2Q9NQ03 307 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 GBF1Q92538 1859 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 E9PLN8 166 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 NDUFS5O43920 106 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 IGKV1-16P04430 117 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 ZNF883P0CG24 379 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 CYYR1Q96J86 154 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 PNRC2Q9NPJ4 139 aaKnown RBP12.98□□□□□ -0.33
COL18A1-203ENST00000359759 F5H768 121 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 PRB2P02812 416 aaPredicted RBP12.98□□□□□ -0.33
COL18A1-203ENST00000359759 EFNA4P52798 201 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 SPACA3Q8IXA5 215 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 CRLF1O75462 422 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 MINOS1Q5TGZ0 78 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 MINOS1-NBL1R4GNA1 71 aa12.98□□□□□ -0.33
COL18A1-203ENST00000359759 A0A096LPF7 62 aa12.97□□□□□ -0.33
COL18A1-203ENST00000359759 GAGE6Q13070 117 aa12.97□□□□□ -0.33
COL18A1-203ENST00000359759 CLPSL2Q6UWE3 100 aa12.97□□□□□ -0.33
COL18A1-203ENST00000359759 RNASE13Q5GAN3 156 aaKnown RBP12.97□□□□□ -0.33
COL18A1-203ENST00000359759 THAP8Q8NA92 274 aa12.97□□□□□ -0.33
COL18A1-203ENST00000359759 MMP23AO75900 390 aa12.97□□□□□ -0.33
COL18A1-203ENST00000359759 IGKV1D-17A0A075B6S4 117 aa12.97□□□□□ -0.33
COL18A1-203ENST00000359759 hADV29S1A0JD25 119 aa12.97□□□□□ -0.33
COL18A1-203ENST00000359759 COL4A5P29400 1685 aa12.97□□□□□ -0.33
COL18A1-203ENST00000359759 TRAV12-2A0A075B6T6 113 aa12.97□□□□□ -0.33
COL18A1-203ENST00000359759 IL18BPO95998 194 aa12.97□□□□□ -0.33
COL18A1-203ENST00000359759 UBL5Q9BZL1 73 aa12.97□□□□□ -0.33
COL18A1-203ENST00000359759 RP1L1Q8IWN7 2480 aaPredicted RBP12.96□□□□□ -0.33
COL18A1-203ENST00000359759 GNLYP22749 145 aa12.96□□□□□ -0.33
COL18A1-203ENST00000359759 LYPD1Q8N2G4 141 aa12.96□□□□□ -0.33
COL18A1-203ENST00000359759 GFRA4Q9GZZ7 299 aa12.96□□□□□ -0.33
COL18A1-203ENST00000359759 A0A0G2JNJ9 132 aa12.96□□□□□ -0.33
COL18A1-203ENST00000359759 WIPF3A6NGB9 483 aa12.96□□□□□ -0.33
COL18A1-203ENST00000359759 Q9UFV3 132 aa12.96□□□□□ -0.33
COL18A1-203ENST00000359759 Q6ZRM9 215 aa12.96□□□□□ -0.34
COL18A1-203ENST00000359759 C18orf32Q8TCD1 76 aa12.96□□□□□ -0.34
COL18A1-203ENST00000359759 I3L3M4 83 aa12.96□□□□□ -0.34
COL18A1-203ENST00000359759 DSCR8Q96T75 97 aa12.96□□□□□ -0.34
COL18A1-203ENST00000359759 ANXA2RQ3ZCQ2 193 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 C2orf66Q6UXQ4 117 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 TMEM75Q8N9X5 138 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 USMG5Q96IX5 58 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 PLXNA1Q9UIW2 1896 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 TNS1Q9HBL0 1735 aaKnown RBP12.95□□□□□ -0.34
COL18A1-203ENST00000359759 CGB3P0DN86 165 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 SHANK2-AS3Q9BTD1 123 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 COL11A2P13942 1736 aaPredicted RBP12.95□□□□□ -0.34
COL18A1-203ENST00000359759 TRBV25-1A0A075B6N4 114 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 AZU1P20160 251 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 C5orf47Q569G3 176 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 IGHV1-24A0A0C4DH33 117 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 C9JQL5 133 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 ATP6V0BQ99437 205 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 HS3ST6Q96QI5 342 aa12.95□□□□□ -0.34
COL18A1-203ENST00000359759 SLAQ13239 276 aa12.94□□□□□ -0.34
COL18A1-203ENST00000359759 SAA4P35542 130 aa12.94□□□□□ -0.34
COL18A1-203ENST00000359759 PPDPFLQ8WWR9 84 aa12.94□□□□□ -0.34
COL18A1-203ENST00000359759 ETDBQ3ZM63 59 aa12.94□□□□□ -0.34
COL18A1-203ENST00000359759 C1QTNF4Q9BXJ3 329 aa12.94□□□□□ -0.34
COL18A1-203ENST00000359759 MRPL51Q4U2R6 128 aaKnown RBP12.94□□□□□ -0.34
COL18A1-203ENST00000359759 MAPK1IP1LQ8NDC0 245 aa12.94□□□□□ -0.34
COL18A1-203ENST00000359759 TMEM141Q96I45 108 aa12.94□□□□□ -0.34
COL18A1-203ENST00000359759 DAZ1Q9NQZ3 744 aaKnown RBP12.94□□□□□ -0.34
COL18A1-203ENST00000359759 CLPSL1A2RUU4 121 aa12.94□□□□□ -0.34
COL18A1-203ENST00000359759 INAFM2P0DMQ5 153 aa12.94□□□□□ -0.34
COL18A1-203ENST00000359759 DEFB105AQ8NG35 78 aa12.94□□□□□ -0.34
COL18A1-203ENST00000359759 COL24A1Q17RW2 1714 aa12.94□□□□□ -0.34
COL18A1-203ENST00000359759 PAX9P55771 341 aa12.93□□□□□ -0.34
COL18A1-203ENST00000359759 CEND1Q8N111 149 aa12.93□□□□□ -0.34
COL18A1-203ENST00000359759 Q8N8P6 123 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms