RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 RFNGQ9Y644 331 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 UBE2CO00762 179 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 VSIRQ9H7M9 311 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 PTPRDP23468 1912 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 CSRP1P21291 193 aaKnown RBP4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 PFN2P35080 140 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 TCF15Q12870 199 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 TREML4Q6UXN2 200 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 AMN1Q8IY45 258 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 LYPD1Q8N2G4 141 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 FAM110DQ8TAY7 271 aaPredicted RBP4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 AMBPP02760 352 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 PRR31Q5SQ13 230 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 MALRD1Q5VYJ5 2156 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 GAGE12JA6NER3 117 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 SYS1-DBNDD2H3BUS1 97 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 GAGE1Q13065 139 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 GAGE4Q13068 117 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 GAGE5Q13069 117 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 TMEM243Q9BU79 118 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 TRAV12-1A0A0B4J245 112 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 PINLYPA6NC86 204 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 EGR2P11161 476 aaPredicted RBP4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 MRPL14Q6P1L8 145 aaKnown RBP4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 IL17RELQ6ZVW7 336 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 FBLN5Q9UBX5 448 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 AZU1P20160 251 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 DAZ1Q9NQZ3 744 aaKnown RBP4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 TMEM242Q9NWH2 141 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 LY75O60449 1722 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 STRCP1A6NGW2 1772 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 SLC25A16P16260 332 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 HAMPP81172 84 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 WDR83OSQ9Y284 106 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 RHODO00212 210 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 DKK1O94907 266 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 FREM1Q5H8C1 2179 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 SHISA3A0PJX4 238 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 TGFBR3LH3BV60 316 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 UBE2BP63146 152 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 ID3Q02535 119 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 LINC01551Q86U37 167 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 NEUROG3Q9Y4Z2 214 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 GREM1O60565 184 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 GLRX5Q86SX6 157 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 IGKV1-9A0A0C4DH69 117 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 PRSS29PA6NIE9 313 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 TRAV13-2A0A0B4J235 113 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 LINC01619G3V211 115 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 FOXG1P55316 489 aaPredicted RBP4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 CFHR1Q03591 330 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 BPESC1Q9GZL8 116 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 DKK4Q9UBT3 224 aa4.72□□□□□ -1.65
SRGAP1-201ENST00000355086 A0A0A6YYD4 124 aa4.71□□□□□ -1.65
SRGAP1-201ENST00000355086 PLXNB1O43157 2135 aa4.71□□□□□ -1.65
SRGAP1-201ENST00000355086 TEX48A0A1B0GUV7 120 aa4.71□□□□□ -1.65
SRGAP1-201ENST00000355086 GAGE12BA1L429 117 aa4.71□□□□□ -1.65
SRGAP1-201ENST00000355086 SRRM5B3KS81 715 aa4.71□□□□□ -1.65
SRGAP1-201ENST00000355086 IGHG4P01861 327 aa4.71□□□□□ -1.65
SRGAP1-201ENST00000355086 VWC2Q2TAL6 325 aa4.71□□□□□ -1.65
SRGAP1-201ENST00000355086 IGFL4Q6B9Z1 124 aa4.71□□□□□ -1.65
SRGAP1-201ENST00000355086 TRACP01848 142 aa4.71□□□□□ -1.65
SRGAP1-201ENST00000355086 SAA4P35542 130 aa4.71□□□□□ -1.65
SRGAP1-201ENST00000355086 ADAMTSL3P82987 1691 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 MORN5Q5VZ52 161 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 HIST3H2BBQ8N257 126 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 TMEM105Q8N8V8 129 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 FAM208BQ5VWN6 2430 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 TCF20Q9UGU0 1960 aaKnown RBP4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 SPANXA1Q9NS26 97 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 C5orf47Q569G3 176 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 NEGR1Q7Z3B1 354 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 MDS2Q8NDY4 140 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 SCN10AQ9Y5Y9 1956 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 KNCNA6PVL3 124 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 SPINK13Q1W4C9 94 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 TP53TG1Q9Y2A0 90 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 NXPH4O95158 308 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 MUC4Q99102 2169 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 CHKB-CPT1BH3BT56 60 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 UBE2V1Q13404 147 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 C1orf194Q5T5A4 169 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 TMEM258P61165 79 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 GAGE6Q13070 117 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 ZNF124Q15973 351 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 Q96MF0 132 aa4.71□□□□□ -1.66
SRGAP1-201ENST00000355086 RNF223E7ERA6 249 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 CRLF1O75462 422 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 PLSCR4Q9NRQ2 329 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 OVOL3O00110 214 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 IGKV1-5P01602 117 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 MCRIP2Q9BUT9 160 aaKnown RBP4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 MYLKQ15746 1914 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 GAGE7O76087 117 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 IGLV3-19P01714 112 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 GAGE12FP0CL80 117 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 GAGE12GP0CL81 117 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 GAGE12IP0CL82 117 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 GATA3P23771 443 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 NABP1Q96AH0 204 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms