RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 COL4A3Q01955 1670 aa12.14□□□□□ -0.47
PCDHB13-201ENST00000341948 WISP2O76076 250 aa12.14□□□□□ -0.47
PCDHB13-201ENST00000341948 LOC105371267A0A1B0GV96 52 aa12.14□□□□□ -0.47
PCDHB13-201ENST00000341948 C22orf46C9J442 243 aa12.14□□□□□ -0.47
PCDHB13-201ENST00000341948 LINC00614P0C842 121 aa12.14□□□□□ -0.47
PCDHB13-201ENST00000341948 C9orf139Q6ZV77 190 aa12.14□□□□□ -0.47
PCDHB13-201ENST00000341948 TTC9CQ8N5M4 171 aa12.14□□□□□ -0.47
PCDHB13-201ENST00000341948 Q8NA96 180 aa12.14□□□□□ -0.47
PCDHB13-201ENST00000341948 IGHV2-5P01817 119 aa12.13□□□□□ -0.47
PCDHB13-201ENST00000341948 SEM1Q6ZVN7 128 aa12.13□□□□□ -0.47
PCDHB13-201ENST00000341948 HBDP02042 147 aa12.13□□□□□ -0.47
PCDHB13-201ENST00000341948 TRGV11A0A075B6L2 103 aa12.13□□□□□ -0.47
PCDHB13-201ENST00000341948 TRGV4A0A0C4DH28 118 aa12.13□□□□□ -0.47
PCDHB13-201ENST00000341948 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.13□□□□□ -0.47
PCDHB13-201ENST00000341948 RPL35AP18077 110 aaKnown RBP12.13□□□□□ -0.47
PCDHB13-201ENST00000341948 SMIM12Q96EX1 92 aa12.13□□□□□ -0.47
PCDHB13-201ENST00000341948 LIME1Q9H400 295 aa12.13□□□□□ -0.47
PCDHB13-201ENST00000341948 LY96Q9Y6Y9 160 aa12.13□□□□□ -0.47
PCDHB13-201ENST00000341948 PIEZO2Q9H5I5 2752 aa12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 FCN3O75636 299 aa12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 ACTL10Q5JWF8 245 aa12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 NRGNQ92686 78 aa12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 DAZ1Q9NQZ3 744 aaKnown RBP12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 TOMM40O96008 361 aa12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 ZNF833PQ6ZTB9 187 aa12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 LINC00311Q8N616 119 aa12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 ST6GALNAC6Q969X2 333 aa12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 TMEM14BQ9NUH8 114 aa12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 FAM110DQ8TAY7 271 aaPredicted RBP12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 ALKBH7Q9BT30 221 aaPredicted RBP12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 IGHV4-61A0A0C4DH41 118 aa12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 GZMBP10144 247 aa12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 C1orf122Q6ZSJ8 110 aa12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 GSN-AS1Q9NRJ2 163 aa12.12□□□□□ -0.47
PCDHB13-201ENST00000341948 SNAI2O43623 268 aa12.11□□□□□ -0.47
PCDHB13-201ENST00000341948 LYPD1Q8N2G4 141 aa12.11□□□□□ -0.47
PCDHB13-201ENST00000341948 MRAP2Q96G30 205 aa12.11□□□□□ -0.47
PCDHB13-201ENST00000341948 IGHV2-70P01814 119 aa12.11□□□□□ -0.47
PCDHB13-201ENST00000341948 ZNF138P52744 262 aa12.11□□□□□ -0.47
PCDHB13-201ENST00000341948 CTSZQ9UBR2 303 aa12.11□□□□□ -0.47
PCDHB13-201ENST00000341948 SRSF1Q07955 248 aaKnown RBP eCLIP12.11□□□□□ -0.47
PCDHB13-201ENST00000341948 FREM1Q5H8C1 2179 aa12.11□□□□□ -0.47
PCDHB13-201ENST00000341948 NAV2Q8IVL1 2488 aa12.1□□□□□ -0.47
PCDHB13-201ENST00000341948 IGHV4-30-2A0A087WSY4 118 aa12.1□□□□□ -0.47
PCDHB13-201ENST00000341948 H3BRM9 83 aa12.1□□□□□ -0.47
PCDHB13-201ENST00000341948 C15orf65H3BRN8 121 aa12.1□□□□□ -0.47
PCDHB13-201ENST00000341948 PLXNB3Q9ULL4 1909 aa12.1□□□□□ -0.47
PCDHB13-201ENST00000341948 NDUFB8O95169 186 aa12.1□□□□□ -0.47
PCDHB13-201ENST00000341948 PLP1P60201 277 aa12.1□□□□□ -0.47
PCDHB13-201ENST00000341948 UBE2CO00762 179 aa12.1□□□□□ -0.47
PCDHB13-201ENST00000341948 SMIM13P0DJ93 91 aa12.1□□□□□ -0.47
PCDHB13-201ENST00000341948 HOXA3O43365 443 aaPredicted RBP12.1□□□□□ -0.47
PCDHB13-201ENST00000341948 IFI27P40305 119 aaPredicted RBP12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 ORMDL2Q53FV1 153 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 CYSLTR1Q9Y271 337 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 SRRM4A7MD48 611 aaKnown RBP12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 IGHV4-39P01824 125 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 ZNF134P52741 427 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 CHCHD1Q96BP2 118 aaKnown RBP12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 NDUFA3O95167 84 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 NIT1Q86X76 327 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 NDUFA4L2Q9NRX3 87 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 IGKV1-39P01597 117 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 IGKV1D-39P04432 117 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 DIAPH2-AS1Q14236 149 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 IGFL4Q6B9Z1 124 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 C11orf53Q8IXP5 236 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 HIST1H2BLQ99880 126 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 PRORYQ9H606 182 aa12.09□□□□□ -0.47
PCDHB13-201ENST00000341948 TRAV8-1A0A0A6YYK1 113 aa12.08□□□□□ -0.47
PCDHB13-201ENST00000341948 VCX2Q9H322 139 aa12.08□□□□□ -0.47
PCDHB13-201ENST00000341948 PCDH15Q96QU1 1955 aa12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 EVI2AP22794 236 aa12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 PAX9P55771 341 aa12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 LCN12Q6JVE5 192 aa12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 RASL11AQ6T310 242 aa12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 Q8TAT8 98 aa12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 PSG3Q16557 428 aa12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 MRPS16Q9Y3D3 137 aaKnown RBP12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 FXYD7P58549 80 aa12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 TMEM249Q2WGJ8 235 aa12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 SPRNQ5BIV9 151 aa12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 FAM90A2PQ658T7 463 aa12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 UBE2E2Q96LR5 201 aa12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 SHANK2-AS3Q9BTD1 123 aa12.08□□□□□ -0.48
PCDHB13-201ENST00000341948 DAZAP2Q15038 168 aaPredicted RBP12.07□□□□□ -0.48
PCDHB13-201ENST00000341948 DEFB112Q30KQ8 113 aa12.07□□□□□ -0.48
PCDHB13-201ENST00000341948 LINC00477Q96M19 166 aa12.07□□□□□ -0.48
PCDHB13-201ENST00000341948 SPOCK3Q9BQ16 436 aa12.07□□□□□ -0.48
PCDHB13-201ENST00000341948 LYZL1Q6UWQ5 148 aa12.07□□□□□ -0.48
PCDHB13-201ENST00000341948 LINC01619G3V211 115 aa12.07□□□□□ -0.48
PCDHB13-201ENST00000341948 MST1LQ2TV78 715 aa12.07□□□□□ -0.48
PCDHB13-201ENST00000341948 HIST3H2BBQ8N257 126 aa12.07□□□□□ -0.48
PCDHB13-201ENST00000341948 TLN1Q9Y490 2541 aaKnown RBP12.06□□□□□ -0.48
PCDHB13-201ENST00000341948 TRAV12-3A0A0B4J271 114 aa12.06□□□□□ -0.48
PCDHB13-201ENST00000341948 DEFB131AP59861 70 aa12.06□□□□□ -0.48
PCDHB13-201ENST00000341948 C1QTNF4Q9BXJ3 329 aa12.06□□□□□ -0.48
PCDHB13-201ENST00000341948 JKAMPQ9P055 326 aa12.06□□□□□ -0.48
PCDHB13-201ENST00000341948 TOMM7Q9P0U1 55 aa12.06□□□□□ -0.48
PCDHB13-201ENST00000341948 TRAV9-2A0A087WT02 112 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms