RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 TRAV8-6A0A0B4J262 113 aa12.04□□□□□ -0.48
C9orf47-201ENST00000334490 FOXC2Q99958 501 aa12.04□□□□□ -0.48
C9orf47-201ENST00000334490 DERL1Q9BUN8 251 aa12.04□□□□□ -0.48
C9orf47-201ENST00000334490 WNK1Q9H4A3 2382 aa12.04□□□□□ -0.48
C9orf47-201ENST00000334490 TRGV1A0A0A0MS02 117 aa12.04□□□□□ -0.48
C9orf47-201ENST00000334490 IGKV1-39P01597 117 aa12.04□□□□□ -0.48
C9orf47-201ENST00000334490 IGKV1D-39P04432 117 aa12.04□□□□□ -0.48
C9orf47-201ENST00000334490 FAM19A2Q8N3H0 131 aa12.03□□□□□ -0.48
C9orf47-201ENST00000334490 RIPPLY3P57055 190 aa12.03□□□□□ -0.48
C9orf47-201ENST00000334490 FAM120AOSQ5T036 256 aa12.03□□□□□ -0.48
C9orf47-201ENST00000334490 C1QL4Q86Z23 238 aa12.03□□□□□ -0.48
C9orf47-201ENST00000334490 LYPD1Q8N2G4 141 aa12.03□□□□□ -0.48
C9orf47-201ENST00000334490 TMEM190Q8WZ59 177 aa12.03□□□□□ -0.48
C9orf47-201ENST00000334490 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.03□□□□□ -0.48
C9orf47-201ENST00000334490 TCF21O43680 179 aa12.03□□□□□ -0.48
C9orf47-201ENST00000334490 COX6CP09669 75 aa12.03□□□□□ -0.48
C9orf47-201ENST00000334490 TMEM249Q2WGJ8 235 aa12.03□□□□□ -0.48
C9orf47-201ENST00000334490 PPBPP02775 128 aa12.03□□□□□ -0.48
C9orf47-201ENST00000334490 YPEL3P61236 119 aaPredicted RBP12.03□□□□□ -0.48
C9orf47-201ENST00000334490 WT1-ASQ06250 92 aa12.03□□□□□ -0.48
C9orf47-201ENST00000334490 SRSF4Q08170 494 aaKnown RBP12.03□□□□□ -0.48
C9orf47-201ENST00000334490 PSG3Q16557 428 aa12.03□□□□□ -0.48
C9orf47-201ENST00000334490 IGHV4-59P01825 116 aa12.02□□□□□ -0.48
C9orf47-201ENST00000334490 RPL24P83731 157 aaKnown RBP12.02□□□□□ -0.48
C9orf47-201ENST00000334490 CHCHD5Q9BSY4 110 aa12.02□□□□□ -0.48
C9orf47-201ENST00000334490 ALKBH7Q9BT30 221 aaPredicted RBP12.02□□□□□ -0.48
C9orf47-201ENST00000334490 Q8NFD4 153 aa12.02□□□□□ -0.49
C9orf47-201ENST00000334490 MRAP2Q96G30 205 aa12.02□□□□□ -0.49
C9orf47-201ENST00000334490 DAZAP2Q15038 168 aaPredicted RBP12.02□□□□□ -0.49
C9orf47-201ENST00000334490 FGF23Q9GZV9 251 aaPredicted RBP12.02□□□□□ -0.49
C9orf47-201ENST00000334490 DNLZQ5SXM8 178 aa12.02□□□□□ -0.49
C9orf47-201ENST00000334490 IFI27P40305 119 aaPredicted RBP12.01□□□□□ -0.49
C9orf47-201ENST00000334490 ZNF415Q09FC8 603 aa12.01□□□□□ -0.49
C9orf47-201ENST00000334490 ARL6IP6Q8N6S5 226 aa12.01□□□□□ -0.49
C9orf47-201ENST00000334490 VCX2Q9H322 139 aa12.01□□□□□ -0.49
C9orf47-201ENST00000334490 LOC107984156A0A0G2JMH3 177 aa12.01□□□□□ -0.49
C9orf47-201ENST00000334490 INSP01308 110 aa12.01□□□□□ -0.49
C9orf47-201ENST00000334490 COTL1Q14019 142 aa12.01□□□□□ -0.49
C9orf47-201ENST00000334490 ARL17AQ8IVW1 177 aa12.01□□□□□ -0.49
C9orf47-201ENST00000334490 LHBP01229 141 aa12.01□□□□□ -0.49
C9orf47-201ENST00000334490 EVI2AP22794 236 aa12.01□□□□□ -0.49
C9orf47-201ENST00000334490 JKAMPQ9P055 326 aa12.01□□□□□ -0.49
C9orf47-201ENST00000334490 UQCR10Q9UDW1 63 aa12.01□□□□□ -0.49
C9orf47-201ENST00000334490 CEP295Q9C0D2 2601 aa12.01□□□□□ -0.49
C9orf47-201ENST00000334490 IGHV3-73A0A0B4J1V6 119 aa12□□□□□ -0.49
C9orf47-201ENST00000334490 H3BRM9 83 aa12□□□□□ -0.49
C9orf47-201ENST00000334490 HOXB4P17483 251 aaPredicted RBP12□□□□□ -0.49
C9orf47-201ENST00000334490 GFI1BQ5VTD9 330 aa12□□□□□ -0.49
C9orf47-201ENST00000334490 IGHV3-53P01767 116 aa12□□□□□ -0.49
C9orf47-201ENST00000334490 SPOCK3Q9BQ16 436 aa12□□□□□ -0.49
C9orf47-201ENST00000334490 LYL1P12980 280 aa12□□□□□ -0.49
C9orf47-201ENST00000334490 HINT1P49773 126 aaPredicted RBP12□□□□□ -0.49
C9orf47-201ENST00000334490 OR13C6PQ8NH95 151 aa12□□□□□ -0.49
C9orf47-201ENST00000334490 COPS9Q8WXC6 57 aa12□□□□□ -0.49
C9orf47-201ENST00000334490 PRORYQ9H606 182 aa12□□□□□ -0.49
C9orf47-201ENST00000334490 LINC01551Q86U37 167 aa12□□□□□ -0.49
C9orf47-201ENST00000334490 TCTEX1D4Q5JR98 221 aa11.99□□□□□ -0.49
C9orf47-201ENST00000334490 C10orf105Q8TEF2 133 aa11.99□□□□□ -0.49
C9orf47-201ENST00000334490 VPREB3Q9UKI3 123 aa11.99□□□□□ -0.49
C9orf47-201ENST00000334490 PRDM13Q9H4Q3 707 aa11.99□□□□□ -0.49
C9orf47-201ENST00000334490 PDE6HQ13956 83 aa11.99□□□□□ -0.49
C9orf47-201ENST00000334490 DTX2Q86UW9 622 aa11.99□□□□□ -0.49
C9orf47-201ENST00000334490 OR9G4Q8NGQ1 327 aa11.99□□□□□ -0.49
C9orf47-201ENST00000334490 PRADC1Q9BSG0 188 aa11.99□□□□□ -0.49
C9orf47-201ENST00000334490 NXT2Q9NPJ8 142 aaKnown RBP11.99□□□□□ -0.49
C9orf47-201ENST00000334490 CYSLTR1Q9Y271 337 aa11.99□□□□□ -0.49
C9orf47-201ENST00000334490 WIPF3A6NGB9 483 aa11.99□□□□□ -0.49
C9orf47-201ENST00000334490 ELANEP08246 267 aa11.99□□□□□ -0.49
C9orf47-201ENST00000334490 SRSF1Q07955 248 aaKnown RBP eCLIP11.99□□□□□ -0.49
C9orf47-201ENST00000334490 FBXL19-AS1Q494R0 122 aa11.99□□□□□ -0.49
C9orf47-201ENST00000334490 PARD6GQ9BYG4 376 aaPredicted RBP11.99□□□□□ -0.49
C9orf47-201ENST00000334490 A0A087WX48 190 aa11.98□□□□□ -0.49
C9orf47-201ENST00000334490 SH2D1AO60880 128 aa11.98□□□□□ -0.49
C9orf47-201ENST00000334490 LYZL1Q6UWQ5 148 aa11.98□□□□□ -0.49
C9orf47-201ENST00000334490 OBSL1O75147 1896 aa11.98□□□□□ -0.49
C9orf47-201ENST00000334490 IGKV3D-20A0A0C4DH25 116 aa11.98□□□□□ -0.49
C9orf47-201ENST00000334490 SERF1AO75920 110 aa11.98□□□□□ -0.49
C9orf47-201ENST00000334490 HOXA5P20719 270 aa11.98□□□□□ -0.49
C9orf47-201ENST00000334490 PAX9P55771 341 aa11.98□□□□□ -0.49
C9orf47-201ENST00000334490 ERCC8Q13216 396 aa11.98□□□□□ -0.49
C9orf47-201ENST00000334490 XCL2Q9UBD3 114 aa11.98□□□□□ -0.49
C9orf47-201ENST00000334490 ERASQ7Z444 233 aa11.98□□□□□ -0.49
C9orf47-201ENST00000334490 ADMP35318 185 aa11.97□□□□□ -0.49
C9orf47-201ENST00000334490 CFAP161Q6P656 301 aa11.97□□□□□ -0.49
C9orf47-201ENST00000334490 RNF182Q8N6D2 247 aa11.97□□□□□ -0.49
C9orf47-201ENST00000334490 NCOA6Q14686 2063 aaPredicted RBP11.97□□□□□ -0.49
C9orf47-201ENST00000334490 IGHV4-38-2P0DP08 117 aa11.97□□□□□ -0.49
C9orf47-201ENST00000334490 KRTAP27-1Q3LI81 207 aa11.97□□□□□ -0.49
C9orf47-201ENST00000334490 LINC00479Q96M42 142 aa11.97□□□□□ -0.49
C9orf47-201ENST00000334490 DEFB130BP0DP73 79 aa11.97□□□□□ -0.49
C9orf47-201ENST00000334490 DEFB130AP0DP74 79 aa11.97□□□□□ -0.49
C9orf47-201ENST00000334490 MALP21145 153 aa11.97□□□□□ -0.49
C9orf47-201ENST00000334490 JOSD1Q15040 202 aaPredicted RBP11.97□□□□□ -0.49
C9orf47-201ENST00000334490 IGFBPL1Q8WX77 278 aa11.97□□□□□ -0.49
C9orf47-201ENST00000334490 NDUFA4O00483 81 aa11.97□□□□□ -0.49
C9orf47-201ENST00000334490 CRPP02741 224 aa11.97□□□□□ -0.49
C9orf47-201ENST00000334490 RPL36AP83881 106 aaKnown RBP11.97□□□□□ -0.49
C9orf47-201ENST00000334490 OR11H6Q8NGC7 330 aa11.97□□□□□ -0.49
C9orf47-201ENST00000334490 RPL36ALQ969Q0 106 aaKnown RBP11.97□□□□□ -0.49
C9orf47-201ENST00000334490 UBE2DNLQ8IWF7 75 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms