RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 M0R3E3 92 aa11.38□□□□□ -0.59
TPM3-206ENST00000330188 GNLYP22749 145 aa11.38□□□□□ -0.59
TPM3-206ENST00000330188 C20orf144Q9BQM9 153 aa11.38□□□□□ -0.59
TPM3-206ENST00000330188 C2orf88Q9BSF0 95 aa11.38□□□□□ -0.59
TPM3-206ENST00000330188 ZMAT5Q9UDW3 170 aaKnown RBP11.38□□□□□ -0.59
TPM3-206ENST00000330188 OVOL3O00110 214 aa11.38□□□□□ -0.59
TPM3-206ENST00000330188 CTSGP08311 255 aa11.38□□□□□ -0.59
TPM3-206ENST00000330188 SAA4P35542 130 aa11.38□□□□□ -0.59
TPM3-206ENST00000330188 LBHQ53QV2 105 aaPredicted RBP11.38□□□□□ -0.59
TPM3-206ENST00000330188 A0A1B0GV90 55 aa11.37□□□□□ -0.59
TPM3-206ENST00000330188 APOHP02749 345 aaPredicted RBP11.37□□□□□ -0.59
TPM3-206ENST00000330188 C3orf79P0CE67 100 aa11.37□□□□□ -0.59
TPM3-206ENST00000330188 NTF3P20783 257 aa11.37□□□□□ -0.59
TPM3-206ENST00000330188 FOXA3P55318 350 aaPredicted RBP11.37□□□□□ -0.59
TPM3-206ENST00000330188 VAMP8Q9BV40 100 aa11.37□□□□□ -0.59
TPM3-206ENST00000330188 PAM16Q9Y3D7 125 aa11.37□□□□□ -0.59
TPM3-206ENST00000330188 FAM110DQ8TAY7 271 aaPredicted RBP11.36□□□□□ -0.59
TPM3-206ENST00000330188 TXN2Q99757 166 aa11.36□□□□□ -0.59
TPM3-206ENST00000330188 AAMDCQ9H7C9 122 aa11.36□□□□□ -0.59
TPM3-206ENST00000330188 HAX1O00165 279 aa11.36□□□□□ -0.59
TPM3-206ENST00000330188 EREGO14944 169 aa11.36□□□□□ -0.59
TPM3-206ENST00000330188 CRIP1P50238 77 aa11.36□□□□□ -0.59
TPM3-206ENST00000330188 URB1-AS1Q96HZ7 61 aa11.36□□□□□ -0.59
TPM3-206ENST00000330188 LPAR2Q9HBW0 351 aa11.36□□□□□ -0.59
TPM3-206ENST00000330188 HSBP1O75506 76 aa11.35□□□□□ -0.59
TPM3-206ENST00000330188 SCGB2A1O75556 95 aa11.35□□□□□ -0.59
TPM3-206ENST00000330188 LINC00469Q8N7U9 141 aa11.35□□□□□ -0.59
TPM3-206ENST00000330188 RABAC1Q9UI14 185 aa11.35□□□□□ -0.59
TPM3-206ENST00000330188 SH2D7A6NKC9 451 aaPredicted RBP11.35□□□□□ -0.59
TPM3-206ENST00000330188 ATP6V0E1O15342 81 aa11.35□□□□□ -0.59
TPM3-206ENST00000330188 RPL7P18124 248 aaKnown RBP11.35□□□□□ -0.59
TPM3-206ENST00000330188 KLK9Q2XQG4 91 aa11.35□□□□□ -0.59
TPM3-206ENST00000330188 RNASEKQ6P5S7 137 aaKnown RBP11.35□□□□□ -0.59
TPM3-206ENST00000330188 UNQ5815/PRO19632Q6UWF5 114 aa11.35□□□□□ -0.59
TPM3-206ENST00000330188 BORCS7Q96B45 105 aa11.35□□□□□ -0.59
TPM3-206ENST00000330188 TMUB1Q9BVT8 246 aa11.35□□□□□ -0.59
TPM3-206ENST00000330188 KLK9Q9UKQ9 250 aa11.35□□□□□ -0.59
TPM3-206ENST00000330188 NPFFO15130 113 aa11.34□□□□□ -0.59
TPM3-206ENST00000330188 PSG9Q00887 426 aa11.34□□□□□ -0.59
TPM3-206ENST00000330188 ECSCRQ19T08 205 aa11.34□□□□□ -0.59
TPM3-206ENST00000330188 ZNF502Q8TBZ5 544 aa11.34□□□□□ -0.59
TPM3-206ENST00000330188 C8orf49Q96NF6 230 aa11.34□□□□□ -0.59
TPM3-206ENST00000330188 SNHG12Q9BXW3 62 aa11.34□□□□□ -0.59
TPM3-206ENST00000330188 SMAD5-AS1Q9Y6J3 95 aa11.34□□□□□ -0.59
TPM3-206ENST00000330188 MED13LQ71F56 2210 aa11.34□□□□□ -0.59
TPM3-206ENST00000330188 SERTM2A0A1B0GWG4 89 aa11.33□□□□□ -0.6
TPM3-206ENST00000330188 M0R2Z0 102 aa11.33□□□□□ -0.6
TPM3-206ENST00000330188 CHEK1O14757 476 aa11.33□□□□□ -0.6
TPM3-206ENST00000330188 MIEN1Q9BRT3 115 aa11.33□□□□□ -0.6
TPM3-206ENST00000330188 NCOR2Q9Y618 2525 aa11.33□□□□□ -0.6
TPM3-206ENST00000330188 LOC102724200A0A096LPH7 203 aaPredicted RBP11.33□□□□□ -0.6
TPM3-206ENST00000330188 CENPVL3A0A0U1RRI6 287 aa11.33□□□□□ -0.6
TPM3-206ENST00000330188 IGHV4-39P01824 125 aa11.33□□□□□ -0.6
TPM3-206ENST00000330188 CSN1S1P47710 185 aa11.33□□□□□ -0.6
TPM3-206ENST00000330188 C15orf32Q32M92 178 aa11.33□□□□□ -0.6
TPM3-206ENST00000330188 A0A1B0GUT8 65 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 FAM181BA6NEQ2 426 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 ARMS2P0C7Q2 107 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 GPR183P32249 361 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 CTRLP40313 264 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 NDFIP1Q9BT67 221 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 CHD8Q9HCK8 2581 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 SVEP1Q4LDE5 3571 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 IGHV3OR16-8A0A075B7F1 116 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 IGKV2-40A0A087WW87 121 aaPredicted RBP11.32□□□□□ -0.6
TPM3-206ENST00000330188 IGHV3-35A0A0C4DH35 117 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 IGKV2D-40P01614 121 aaPredicted RBP11.32□□□□□ -0.6
TPM3-206ENST00000330188 RAB4AP20338 218 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 RHOGP84095 191 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 FAM162BQ5T6X4 162 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 EBLN2Q6P2I7 272 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 ZNF705AQ6ZN79 300 aaPredicted RBP11.32□□□□□ -0.6
TPM3-206ENST00000330188 ARL6IP6Q8N6S5 226 aa11.32□□□□□ -0.6
TPM3-206ENST00000330188 ITPR1Q14643 2758 aa11.31□□□□□ -0.6
TPM3-206ENST00000330188 LINC01548A6NM66 108 aa11.31□□□□□ -0.6
TPM3-206ENST00000330188 M0QZ24 198 aa11.31□□□□□ -0.6
TPM3-206ENST00000330188 M0R143 59 aa11.31□□□□□ -0.6
TPM3-206ENST00000330188 CT45A10P0DMU9 189 aa11.31□□□□□ -0.6
TPM3-206ENST00000330188 GATD1Q8NB37 220 aa11.31□□□□□ -0.6
TPM3-206ENST00000330188 ZFAND3Q9H8U3 227 aa11.31□□□□□ -0.6
TPM3-206ENST00000330188 G3V318 75 aa11.3□□□□□ -0.6
TPM3-206ENST00000330188 IGHG4P01861 327 aa11.3□□□□□ -0.6
TPM3-206ENST00000330188 RIGQ13278 110 aa11.3□□□□□ -0.6
TPM3-206ENST00000330188 COX8CQ7Z4L0 72 aa11.3□□□□□ -0.6
TPM3-206ENST00000330188 C5orf56Q8N8D9 126 aa11.3□□□□□ -0.6
TPM3-206ENST00000330188 C2orf70A6NJV1 201 aa11.3□□□□□ -0.6
TPM3-206ENST00000330188 CLEC3BP05452 202 aa11.3□□□□□ -0.6
TPM3-206ENST00000330188 SPATA45Q537H7 98 aa11.3□□□□□ -0.6
TPM3-206ENST00000330188 Q6AWC8 147 aa11.3□□□□□ -0.6
TPM3-206ENST00000330188 CHCHD1Q96BP2 118 aaKnown RBP11.3□□□□□ -0.6
TPM3-206ENST00000330188 CCDC140Q96MF4 163 aa11.3□□□□□ -0.6
TPM3-206ENST00000330188 ASH1LQ9NR48 2969 aaKnown RBP11.3□□□□□ -0.6
TPM3-206ENST00000330188 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.29□□□□□ -0.6
TPM3-206ENST00000330188 SH2D1AO60880 128 aa11.29□□□□□ -0.6
TPM3-206ENST00000330188 HLA-DMBP28068 263 aa11.29□□□□□ -0.6
TPM3-206ENST00000330188 S100A7P31151 101 aa11.29□□□□□ -0.6
TPM3-206ENST00000330188 PAX8Q06710 450 aa11.29□□□□□ -0.6
TPM3-206ENST00000330188 IGFL4Q6B9Z1 124 aa11.29□□□□□ -0.6
TPM3-206ENST00000330188 LCN12Q6JVE5 192 aa11.29□□□□□ -0.6
TPM3-206ENST00000330188 RNF224P0DH78 156 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms