RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 TRAV12-3A0A0B4J271 114 aa11.01□□□□□ -0.65
NPC1-201ENST00000269228 FNDC10F2Z333 226 aa11.01□□□□□ -0.65
NPC1-201ENST00000269228 TSKUQ8WUA8 353 aa11.01□□□□□ -0.65
NPC1-201ENST00000269228 GAGE10A6NGK3 116 aa11□□□□□ -0.65
NPC1-201ENST00000269228 RNF166Q96A37 237 aaPredicted RBP11□□□□□ -0.65
NPC1-201ENST00000269228 ST20Q9HBF5 79 aa11□□□□□ -0.65
NPC1-201ENST00000269228 SONP18583 2426 aaKnown RBP11□□□□□ -0.65
NPC1-201ENST00000269228 Q8NFD4 153 aa11□□□□□ -0.65
NPC1-201ENST00000269228 SHANK2-AS3Q9BTD1 123 aa11□□□□□ -0.65
NPC1-201ENST00000269228 IGHV4-30-2A0A087WSY4 118 aa11□□□□□ -0.65
NPC1-201ENST00000269228 WT1-ASQ06250 92 aa11□□□□□ -0.65
NPC1-201ENST00000269228 DEFB113Q30KQ7 82 aa11□□□□□ -0.65
NPC1-201ENST00000269228 CACNG7P62955 275 aa10.99□□□□□ -0.65
NPC1-201ENST00000269228 UBE2E2Q96LR5 201 aa10.99□□□□□ -0.65
NPC1-201ENST00000269228 ATP5LO75964 103 aa10.99□□□□□ -0.65
NPC1-201ENST00000269228 IGHV4-39P01824 125 aa10.99□□□□□ -0.65
NPC1-201ENST00000269228 SLC25A34Q6PIV7 304 aa10.99□□□□□ -0.65
NPC1-201ENST00000269228 HIST1H4GQ99525 98 aa10.99□□□□□ -0.65
NPC1-201ENST00000269228 FOXC2Q99958 501 aa10.99□□□□□ -0.65
NPC1-201ENST00000269228 KLF2Q9Y5W3 355 aaPredicted RBP10.99□□□□□ -0.65
NPC1-201ENST00000269228 WDR87Q6ZQQ6 2873 aa10.99□□□□□ -0.65
NPC1-201ENST00000269228 HOXA3O43365 443 aaPredicted RBP10.99□□□□□ -0.65
NPC1-201ENST00000269228 KRTAP27-1Q3LI81 207 aa10.99□□□□□ -0.65
NPC1-201ENST00000269228 CIRBPQ14011 172 aaKnown RBP10.99□□□□□ -0.65
NPC1-201ENST00000269228 TMEM131Q92545 1883 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 F2Z2F3 143 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 LHBP01229 141 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 PLA2G5P39877 138 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 PAX9P55771 341 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 UQCR10Q9UDW1 63 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 TRAV8-6A0A0B4J262 113 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 C12orf54Q6X4T0 127 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 OR11H1Q8NG94 326 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 OR11H2Q8NH07 326 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 LINC00477Q96M19 166 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 DNLZQ5SXM8 178 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 LINC01551Q86U37 167 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 EVI2AP22794 236 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 ADMP35318 185 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 DEFB131AP59861 70 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 PLP1P60201 277 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 PRR31Q5SQ13 230 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 IGFBPL1Q8WX77 278 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 PRR14LQ5THK1 2151 aa10.98□□□□□ -0.65
NPC1-201ENST00000269228 TMEM238LA0A1B0GVL6 79 aa10.97□□□□□ -0.65
NPC1-201ENST00000269228 A6NJY4 79 aa10.97□□□□□ -0.65
NPC1-201ENST00000269228 HOXB4P17483 251 aaPredicted RBP10.97□□□□□ -0.65
NPC1-201ENST00000269228 HOXA5P20719 270 aa10.97□□□□□ -0.65
NPC1-201ENST00000269228 DEFB112Q30KQ8 113 aa10.97□□□□□ -0.65
NPC1-201ENST00000269228 RCHY1Q96PM5 261 aa10.97□□□□□ -0.65
NPC1-201ENST00000269228 NRN1Q9NPD7 142 aa10.97□□□□□ -0.65
NPC1-201ENST00000269228 PSG3Q16557 428 aa10.97□□□□□ -0.65
NPC1-201ENST00000269228 LYPD1Q8N2G4 141 aa10.97□□□□□ -0.65
NPC1-201ENST00000269228 C2orf88Q9BSF0 95 aa10.97□□□□□ -0.65
NPC1-201ENST00000269228 YPEL3P61236 119 aaPredicted RBP10.97□□□□□ -0.65
NPC1-201ENST00000269228 LINC01619G3V211 115 aa10.97□□□□□ -0.65
NPC1-201ENST00000269228 SERF1AO75920 110 aa10.97□□□□□ -0.65
NPC1-201ENST00000269228 CCDC168Q8NDH2 2452 aa10.96□□□□□ -0.65
NPC1-201ENST00000269228 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.96□□□□□ -0.65
NPC1-201ENST00000269228 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
NPC1-201ENST00000269228 KIAA1549LQ6ZVL6 1849 aa10.96□□□□□ -0.65
NPC1-201ENST00000269228 ARL6IP6Q8N6S5 226 aa10.96□□□□□ -0.65
NPC1-201ENST00000269228 HIVEP2P31629 2446 aa10.96□□□□□ -0.66
NPC1-201ENST00000269228 IGHV3-73A0A0B4J1V6 119 aa10.96□□□□□ -0.66
NPC1-201ENST00000269228 IGHV4-59P01825 116 aa10.96□□□□□ -0.66
NPC1-201ENST00000269228 GFI1BQ5VTD9 330 aa10.96□□□□□ -0.66
NPC1-201ENST00000269228 NCOA6Q14686 2063 aaPredicted RBP10.96□□□□□ -0.66
NPC1-201ENST00000269228 ZNF106Q9H2Y7 1883 aaKnown RBP10.96□□□□□ -0.66
NPC1-201ENST00000269228 RIPPLY3P57055 190 aa10.96□□□□□ -0.66
NPC1-201ENST00000269228 ERCC8Q13216 396 aa10.96□□□□□ -0.66
NPC1-201ENST00000269228 LINC00479Q96M42 142 aa10.96□□□□□ -0.66
NPC1-201ENST00000269228 TRGV1A0A0A0MS02 117 aa10.95□□□□□ -0.66
NPC1-201ENST00000269228 SH2D1AO60880 128 aa10.95□□□□□ -0.66
NPC1-201ENST00000269228 LYZL1Q6UWQ5 148 aa10.95□□□□□ -0.66
NPC1-201ENST00000269228 ERASQ7Z444 233 aa10.95□□□□□ -0.66
NPC1-201ENST00000269228 RNF182Q8N6D2 247 aa10.95□□□□□ -0.66
NPC1-201ENST00000269228 JKAMPQ9P055 326 aa10.95□□□□□ -0.66
NPC1-201ENST00000269228 A0A1B0GW64 132 aa10.95□□□□□ -0.66
NPC1-201ENST00000269228 PPBPP02775 128 aa10.95□□□□□ -0.66
NPC1-201ENST00000269228 TMEM170AQ8WVE7 144 aa10.95□□□□□ -0.66
NPC1-201ENST00000269228 TMEM190Q8WZ59 177 aa10.95□□□□□ -0.66
NPC1-201ENST00000269228 LOC107984156A0A0G2JMH3 177 aa10.94□□□□□ -0.66
NPC1-201ENST00000269228 ARL17AQ8IVW1 177 aa10.94□□□□□ -0.66
NPC1-201ENST00000269228 DAZAP2Q15038 168 aaPredicted RBP10.94□□□□□ -0.66
NPC1-201ENST00000269228 TMEM249Q2WGJ8 235 aa10.94□□□□□ -0.66
NPC1-201ENST00000269228 PRORYQ9H606 182 aa10.94□□□□□ -0.66
NPC1-201ENST00000269228 IGHV3-53P01767 116 aa10.94□□□□□ -0.66
NPC1-201ENST00000269228 MRAP2Q96G30 205 aa10.94□□□□□ -0.66
NPC1-201ENST00000269228 ALKBH7Q9BT30 221 aaPredicted RBP10.94□□□□□ -0.66
NPC1-201ENST00000269228 UBE2CO00762 179 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 IFI27P40305 119 aaPredicted RBP10.93□□□□□ -0.66
NPC1-201ENST00000269228 NDUFAF3Q9BU61 184 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 NCR2O95944 276 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 INSP01308 110 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 C10orf105Q8TEF2 133 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 C1QTNF4Q9BXJ3 329 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 GNB1LQ9BYB4 327 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 VCX2Q9H322 139 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 IGHV4-38-2P0DP08 117 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 SRSF1Q07955 248 aaKnown RBP eCLIP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms