RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.27□□□□□ -0.77
CDH11-201ENST00000268603 HIST1H2BHQ93079 126 aa10.27□□□□□ -0.77
CDH11-201ENST00000268603 HIST1H2BNQ99877 126 aa10.27□□□□□ -0.77
CDH11-201ENST00000268603 HIST1H2BMQ99879 126 aa10.27□□□□□ -0.77
CDH11-201ENST00000268603 TRAV12-2A0A075B6T6 113 aa10.27□□□□□ -0.77
CDH11-201ENST00000268603 ZC2HC1BQ5TFG8 222 aa10.27□□□□□ -0.77
CDH11-201ENST00000268603 TP53TG1Q9Y2A0 90 aa10.27□□□□□ -0.77
CDH11-201ENST00000268603 UBE2AP49459 152 aa10.27□□□□□ -0.77
CDH11-201ENST00000268603 COL11A1P12107 1806 aaPredicted RBP10.27□□□□□ -0.77
CDH11-201ENST00000268603 SBF2Q86WG5 1849 aa10.27□□□□□ -0.77
CDH11-201ENST00000268603 PINLYPA6NC86 204 aa10.26□□□□□ -0.77
CDH11-201ENST00000268603 SMIM10L1P0DMW3 83 aa10.26□□□□□ -0.77
CDH11-201ENST00000268603 SMIM10Q96HG1 83 aa10.26□□□□□ -0.77
CDH11-201ENST00000268603 MRPS18CQ9Y3D5 142 aaKnown RBP10.26□□□□□ -0.77
CDH11-201ENST00000268603 OOSP1A8MZH6 123 aa10.26□□□□□ -0.77
CDH11-201ENST00000268603 LINC01590Q5TEZ4 76 aa10.26□□□□□ -0.77
CDH11-201ENST00000268603 RALGAPA1Q6GYQ0 2036 aa10.26□□□□□ -0.77
CDH11-201ENST00000268603 RNASE2P10153 161 aaKnown RBP10.26□□□□□ -0.77
CDH11-201ENST00000268603 HIST1H2BLQ99880 126 aa10.26□□□□□ -0.77
CDH11-201ENST00000268603 I3L3M4 83 aa10.26□□□□□ -0.77
CDH11-201ENST00000268603 DLEU1O43261 78 aa10.26□□□□□ -0.77
CDH11-201ENST00000268603 XCL1P47992 114 aa10.26□□□□□ -0.77
CDH11-201ENST00000268603 MYO16Q9Y6X6 1858 aa10.26□□□□□ -0.77
CDH11-201ENST00000268603 NDUFB1O75438 58 aa10.25□□□□□ -0.77
CDH11-201ENST00000268603 ARMS2P0C7Q2 107 aa10.25□□□□□ -0.77
CDH11-201ENST00000268603 IL18BPO95998 194 aa10.25□□□□□ -0.77
CDH11-201ENST00000268603 IGHG2P01859 326 aa10.25□□□□□ -0.77
CDH11-201ENST00000268603 IGFBP3P17936 291 aaPredicted RBP10.25□□□□□ -0.77
CDH11-201ENST00000268603 SRSF3P84103 164 aaKnown RBP10.25□□□□□ -0.77
CDH11-201ENST00000268603 UBE2V1Q13404 147 aa10.25□□□□□ -0.77
CDH11-201ENST00000268603 FBLIM1Q8WUP2 373 aa10.25□□□□□ -0.77
CDH11-201ENST00000268603 RHODO00212 210 aa10.25□□□□□ -0.77
CDH11-201ENST00000268603 UBE2CO00762 179 aa10.25□□□□□ -0.77
CDH11-201ENST00000268603 CFHR2P36980 270 aa10.25□□□□□ -0.77
CDH11-201ENST00000268603 IGKV1D-12P01611 117 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 RFNGQ9Y644 331 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 SHISA9B4DS77 424 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 HLA-DRB4P13762 266 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 TRGV9Q99603 122 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 HLA-DRB4X5D2U9 266 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 LINC00271P0C7V0 271 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 FANCD2OSQ96PS1 177 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 MTCL1Q9Y4B5 1905 aaKnown RBP10.24□□□□□ -0.77
CDH11-201ENST00000268603 RTTNQ86VV8 2226 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 LMO1P25800 156 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 ATRAIDQ6UW56 229 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 AMN1Q8IY45 258 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 CTHRC1Q96CG8 243 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 CRYBA4P53673 196 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 CCL18P55774 89 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 SYS1-DBNDD2H3BUS1 97 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 VSIRQ9H7M9 311 aa10.24□□□□□ -0.77
CDH11-201ENST00000268603 PTPRFP10586 1907 aa10.23□□□□□ -0.77
CDH11-201ENST00000268603 QSER1Q2KHR3 1735 aa10.23□□□□□ -0.77
CDH11-201ENST00000268603 NUP35Q8NFH5 326 aa10.23□□□□□ -0.77
CDH11-201ENST00000268603 TSSC4Q9Y5U2 329 aaPredicted RBP10.23□□□□□ -0.77
CDH11-201ENST00000268603 IGLV3-21P80748 117 aaPredicted RBP10.23□□□□□ -0.77
CDH11-201ENST00000268603 DIDO1Q9BTC0 2240 aaKnown RBP10.23□□□□□ -0.77
CDH11-201ENST00000268603 THSD7AQ9UPZ6 1657 aa10.23□□□□□ -0.77
CDH11-201ENST00000268603 GREM1O60565 184 aa10.23□□□□□ -0.77
CDH11-201ENST00000268603 WISP3O95389 354 aaPredicted RBP10.23□□□□□ -0.77
CDH11-201ENST00000268603 FGF6P10767 208 aa10.23□□□□□ -0.77
CDH11-201ENST00000268603 HEPN1Q6WQI6 88 aa10.23□□□□□ -0.77
CDH11-201ENST00000268603 ANKRD29Q8N6D5 301 aa10.23□□□□□ -0.77
CDH11-201ENST00000268603 CASP8AP2Q9UKL3 1982 aa10.22□□□□□ -0.77
CDH11-201ENST00000268603 A8MWP6 167 aa10.22□□□□□ -0.77
CDH11-201ENST00000268603 F8W735 103 aaPredicted RBP10.22□□□□□ -0.77
CDH11-201ENST00000268603 LYPD2Q6UXB3 125 aa10.22□□□□□ -0.77
CDH11-201ENST00000268603 GATA3P23771 443 aa10.22□□□□□ -0.77
CDH11-201ENST00000268603 EIF4EBP2Q13542 120 aaPredicted RBP10.22□□□□□ -0.77
CDH11-201ENST00000268603 DOCK3Q8IZD9 2030 aa10.22□□□□□ -0.77
CDH11-201ENST00000268603 GAGE12HA6NDE8 117 aa10.22□□□□□ -0.77
CDH11-201ENST00000268603 H0YJW9 148 aa10.22□□□□□ -0.77
CDH11-201ENST00000268603 RNASE13Q5GAN3 156 aaKnown RBP10.22□□□□□ -0.77
CDH11-201ENST00000268603 RPP25LQ8N5L8 163 aaKnown RBP10.22□□□□□ -0.77
CDH11-201ENST00000268603 STPG4Q8N801 248 aa10.22□□□□□ -0.77
CDH11-201ENST00000268603 SEC16AO15027 2179 aa10.22□□□□□ -0.77
CDH11-201ENST00000268603 TREML4Q6UXN2 200 aa10.22□□□□□ -0.77
CDH11-201ENST00000268603 LYZL4Q96KX0 146 aa10.22□□□□□ -0.77
CDH11-201ENST00000268603 CARD19Q96LW7 228 aa10.22□□□□□ -0.77
CDH11-201ENST00000268603 ATAD5Q96QE3 1844 aa10.22□□□□□ -0.77
CDH11-201ENST00000268603 HIST3H2BBQ8N257 126 aa10.21□□□□□ -0.77
CDH11-201ENST00000268603 TRAV3A0A0B4J244 114 aa10.21□□□□□ -0.77
CDH11-201ENST00000268603 LOC105371267A0A1B0GV96 52 aa10.21□□□□□ -0.77
CDH11-201ENST00000268603 ATP6V0E1O15342 81 aa10.21□□□□□ -0.77
CDH11-201ENST00000268603 IGHV3-30P01768 117 aa10.21□□□□□ -0.77
CDH11-201ENST00000268603 IGHV3-33P01772 117 aa10.21□□□□□ -0.77
CDH11-201ENST00000268603 IGHV3-30-3P0DP02 117 aa10.21□□□□□ -0.77
CDH11-201ENST00000268603 IGHV3-30-5P0DP03 117 aa10.21□□□□□ -0.77
CDH11-201ENST00000268603 SPANXDQ9BXN6 97 aa10.21□□□□□ -0.77
CDH11-201ENST00000268603 GPHB5Q86YW7 130 aa10.21□□□□□ -0.77
CDH11-201ENST00000268603 PPDPFLQ8WWR9 84 aa10.21□□□□□ -0.77
CDH11-201ENST00000268603 CKAP5Q14008 2032 aa10.21□□□□□ -0.77
CDH11-201ENST00000268603 LRCOL1A6NCL2 159 aa10.21□□□□□ -0.78
CDH11-201ENST00000268603 RNF5Q99942 180 aa10.21□□□□□ -0.78
CDH11-201ENST00000268603 SIGLEC9Q9Y336 463 aa10.21□□□□□ -0.78
CDH11-201ENST00000268603 C3orf79P0CE67 100 aa10.21□□□□□ -0.78
CDH11-201ENST00000268603 C1orf194Q5T5A4 169 aa10.21□□□□□ -0.78
CDH11-201ENST00000268603 NOP10Q9NPE3 64 aaKnown RBP10.21□□□□□ -0.78
CDH11-201ENST00000268603 TDRD15B5MCY1 1934 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms