RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 PSG7Q13046 419 aa10□□□□□ -0.81
SRRM4-201ENST00000267260 USMG5Q96IX5 58 aa10□□□□□ -0.81
SRRM4-201ENST00000267260 FBLN5Q9UBX5 448 aa10□□□□□ -0.81
SRRM4-201ENST00000267260 LINC01560Q8TB33 94 aa9.99□□□□□ -0.81
SRRM4-201ENST00000267260 PTPN13Q12923 2485 aa9.99□□□□□ -0.81
SRRM4-201ENST00000267260 K7EP34 96 aa9.99□□□□□ -0.81
SRRM4-201ENST00000267260 IGLV3-21P80748 117 aaPredicted RBP9.99□□□□□ -0.81
SRRM4-201ENST00000267260 LYZL1Q6UWQ5 148 aa9.99□□□□□ -0.81
SRRM4-201ENST00000267260 FNDC10F2Z333 226 aa9.99□□□□□ -0.81
SRRM4-201ENST00000267260 PYY3Q5JQD4 70 aa9.99□□□□□ -0.81
SRRM4-201ENST00000267260 CHKB-CPT1BH3BT56 60 aa9.99□□□□□ -0.81
SRRM4-201ENST00000267260 LINC01551Q86U37 167 aa9.99□□□□□ -0.81
SRRM4-201ENST00000267260 BOD1L2Q8IYS8 172 aa9.99□□□□□ -0.81
SRRM4-201ENST00000267260 TNRC6BQ9UPQ9 1833 aaKnown RBP9.99□□□□□ -0.81
SRRM4-201ENST00000267260 IGHV3-11P01762 117 aa9.99□□□□□ -0.81
SRRM4-201ENST00000267260 ZNF474Q6S9Z5 364 aaPredicted RBP9.99□□□□□ -0.81
SRRM4-201ENST00000267260 SRSF8Q9BRL6 282 aaKnown RBP9.98□□□□□ -0.81
SRRM4-201ENST00000267260 MYO18BQ8IUG5 2567 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 TET2Q6N021 2002 aaPredicted RBP9.98□□□□□ -0.81
SRRM4-201ENST00000267260 CLPSL1A2RUU4 121 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 PMS2P5A8MQ11 134 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 MINOS1Q5TGZ0 78 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 ZNF319Q9P2F9 582 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 MINOS1-NBL1R4GNA1 71 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 FAM223BA6NKX1 122 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 MRPL14Q6P1L8 145 aaKnown RBP9.98□□□□□ -0.81
SRRM4-201ENST00000267260 LCNL1Q6ZST4 164 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 FAM223AQ8IWN6 122 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 J3KT08 172 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 C1orf159Q96HA4 380 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 KLHDC3Q9BQ90 382 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 PRRC2AP48634 2157 aaKnown RBP9.98□□□□□ -0.81
SRRM4-201ENST00000267260 IGHV1-2P23083 117 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 C15orf32Q32M92 178 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 TMEM256Q8N2U0 113 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 METRNQ9UJH8 293 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 IGKV2-40A0A087WW87 121 aaPredicted RBP9.98□□□□□ -0.81
SRRM4-201ENST00000267260 TRGV1A0A0A0MS02 117 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 IGKV2D-40P01614 121 aaPredicted RBP9.98□□□□□ -0.81
SRRM4-201ENST00000267260 GLRX5Q86SX6 157 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 NKAPP1Q8N9T2 125 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 TMEM141Q96I45 108 aa9.98□□□□□ -0.81
SRRM4-201ENST00000267260 SRRM4A7MD48 611 aaKnown RBP9.97□□□□□ -0.81
SRRM4-201ENST00000267260 FOXL2P58012 376 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 PDE6HQ13956 83 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 C9orf139Q6ZV77 190 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 FAM216BQ8N7L0 139 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 NBL1P41271 181 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 CSPG4Q6UVK1 2322 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 TNS1Q9HBL0 1735 aaKnown RBP9.97□□□□□ -0.81
SRRM4-201ENST00000267260 IGHV3-73A0A0B4J1V6 119 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 NDUFS5O43920 106 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 FGF6P10767 208 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 OR11H6Q8NGC7 330 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 C20orf144Q9BQM9 153 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 TRAV13-2A0A0B4J235 113 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 A0A1W2PPI3 338 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 TRPT1Q86TN4 253 aaKnown RBP9.97□□□□□ -0.81
SRRM4-201ENST00000267260 RNF5Q99942 180 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 SS18L2Q9UHA2 77 aa9.97□□□□□ -0.81
SRRM4-201ENST00000267260 IGHV1-24A0A0C4DH33 117 aa9.96□□□□□ -0.81
SRRM4-201ENST00000267260 A0A1W2PPM0 123 aa9.96□□□□□ -0.81
SRRM4-201ENST00000267260 OOSP1A8MZH6 123 aa9.96□□□□□ -0.81
SRRM4-201ENST00000267260 TRAV25A0A0B4J276 109 aa9.96□□□□□ -0.81
SRRM4-201ENST00000267260 SYNJ2BPP57105 145 aa9.96□□□□□ -0.81
SRRM4-201ENST00000267260 IL17RELQ6ZVW7 336 aa9.96□□□□□ -0.81
SRRM4-201ENST00000267260 TRAV12-1A0A0B4J245 112 aa9.96□□□□□ -0.82
SRRM4-201ENST00000267260 CRLF1O75462 422 aa9.96□□□□□ -0.82
SRRM4-201ENST00000267260 IGHG2P01859 326 aa9.96□□□□□ -0.82
SRRM4-201ENST00000267260 PKIGQ9Y2B9 76 aa9.96□□□□□ -0.82
SRRM4-201ENST00000267260 SH2D1AO60880 128 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 FOXG1P55316 489 aaPredicted RBP9.95□□□□□ -0.82
SRRM4-201ENST00000267260 EIF4EBP2Q13542 120 aaPredicted RBP9.95□□□□□ -0.82
SRRM4-201ENST00000267260 ZNF883P0CG24 379 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 SPATA31B1PQ5VZV4 182 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 CUL9Q8IWT3 2517 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 ACYP1P07311 99 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 ID3Q02535 119 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 MORN5Q5VZ52 161 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 EXOC3-AS1Q8N2X6 119 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 ZNF561-AS1K7EIQ3 104 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 KLRD1Q13241 179 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 C19orf48Q6RUI8 117 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 SPATA25Q9BR10 227 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 SHISA9B4DS77 424 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 C1QCP02747 245 aa9.95□□□□□ -0.82
SRRM4-201ENST00000267260 SRSF2Q01130 221 aaKnown RBP9.94□□□□□ -0.82
SRRM4-201ENST00000267260 TREML4Q6UXN2 200 aa9.94□□□□□ -0.82
SRRM4-201ENST00000267260 THAP8Q8NA92 274 aa9.94□□□□□ -0.82
SRRM4-201ENST00000267260 DSCAMO60469 2012 aa9.94□□□□□ -0.82
SRRM4-201ENST00000267260 TRAV40A0A0B4J280 105 aa9.94□□□□□ -0.82
SRRM4-201ENST00000267260 THBDP07204 575 aa9.94□□□□□ -0.82
SRRM4-201ENST00000267260 CEND1Q8N111 149 aa9.94□□□□□ -0.82
SRRM4-201ENST00000267260 PRO1854Q9UHT4 67 aa9.94□□□□□ -0.82
SRRM4-201ENST00000267260 SAP30O75446 220 aa9.94□□□□□ -0.82
SRRM4-201ENST00000267260 LY6G6FQ5SQ64 297 aa9.94□□□□□ -0.82
SRRM4-201ENST00000267260 TMEM75Q8N9X5 138 aa9.94□□□□□ -0.82
SRRM4-201ENST00000267260 B5MCH6 92 aa9.94□□□□□ -0.82
SRRM4-201ENST00000267260 FXYD7P58549 80 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms