RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 FAM90A20PA6NIJ5 464 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 FAM90A8PA6NJQ4 464 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 FAM90A7PA6NKC0 464 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 FAM90A22PA8MWA6 464 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 FAM90A12PA8MX19 464 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 FAM90A5PA8MXJ8 464 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 FAM90A23PA8MXZ1 464 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 GGTLC3B5MD39 225 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 NPIPB11E5RHQ5 1161 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 FAM90A15PP0C7V4 464 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 FAM90A13PP0C7W8 464 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 FAM90A14PP0C7W9 464 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 FAM90A24PP0C7X0 464 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 RRN3P1Q2M238 152 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 LINC01545Q5VT33 79 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 DUX4L9Q6RFH8 374 aaPredicted RBP10.57□□□□□ -0.72
TMEM260-201ENST00000261556 CIARTQ8N365 385 aaPredicted RBP10.57□□□□□ -0.72
TMEM260-201ENST00000261556 C9orf106Q8NAJ2 232 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 PRSS2P07478 247 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 GCSAMQ8N6F7 178 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 FGFBP3Q8TAT2 258 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 MED13Q9UHV7 2174 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 C20orf204Q6ZNR8 217 aa10.57□□□□□ -0.72
TMEM260-201ENST00000261556 COL8A2P25067 703 aa10.56□□□□□ -0.72
TMEM260-201ENST00000261556 C1orf162Q8NEQ5 155 aaPredicted RBP10.56□□□□□ -0.72
TMEM260-201ENST00000261556 SRSF2Q01130 221 aaKnown RBP10.56□□□□□ -0.72
TMEM260-201ENST00000261556 C17orf82Q86X59 251 aaPredicted RBP10.56□□□□□ -0.72
TMEM260-201ENST00000261556 GTSF1Q8WW33 167 aa10.56□□□□□ -0.72
TMEM260-201ENST00000261556 FNDC1Q4ZHG4 1894 aaPredicted RBP10.56□□□□□ -0.72
TMEM260-201ENST00000261556 TRBV25-1A0A075B6N4 114 aa10.56□□□□□ -0.72
TMEM260-201ENST00000261556 OR9G1Q8NH87 305 aa10.56□□□□□ -0.72
TMEM260-201ENST00000261556 TCF20Q9UGU0 1960 aaKnown RBP10.56□□□□□ -0.72
TMEM260-201ENST00000261556 TRAV40A0A0B4J280 105 aa10.55□□□□□ -0.72
TMEM260-201ENST00000261556 DLX1P56177 255 aa10.55□□□□□ -0.72
TMEM260-201ENST00000261556 KLF5Q13887 457 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-201ENST00000261556 TNFRSF18Q9Y5U5 241 aa10.55□□□□□ -0.72
TMEM260-201ENST00000261556 PMVKQ15126 192 aa10.55□□□□□ -0.72
TMEM260-201ENST00000261556 Q6AWC8 147 aa10.55□□□□□ -0.72
TMEM260-201ENST00000261556 FAM57AQ8TBR7 257 aa10.55□□□□□ -0.72
TMEM260-201ENST00000261556 IGHV1-2P23083 117 aa10.55□□□□□ -0.72
TMEM260-201ENST00000261556 LY6DQ14210 128 aa10.55□□□□□ -0.72
TMEM260-201ENST00000261556 C8orf46Q8TAG6 207 aa10.55□□□□□ -0.72
TMEM260-201ENST00000261556 GDF5OSQ5U4N7 250 aa10.55□□□□□ -0.72
TMEM260-201ENST00000261556 GAGE2AQ6NT46 116 aa10.55□□□□□ -0.72
TMEM260-201ENST00000261556 OR10J6PQ8NGY7 276 aa10.55□□□□□ -0.72
TMEM260-201ENST00000261556 NTN5Q8WTR8 489 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-201ENST00000261556 NABP1Q96AH0 204 aa10.55□□□□□ -0.72
TMEM260-201ENST00000261556 ANKHD1Q8IWZ3 2542 aaKnown RBP10.55□□□□□ -0.72
TMEM260-201ENST00000261556 DOPEY1Q5JWR5 2465 aa10.54□□□□□ -0.72
TMEM260-201ENST00000261556 ZNF815PA8K554 130 aa10.54□□□□□ -0.72
TMEM260-201ENST00000261556 FOXE3Q13461 319 aa10.54□□□□□ -0.72
TMEM260-201ENST00000261556 DDB2Q92466 427 aa10.54□□□□□ -0.72
TMEM260-201ENST00000261556 VPREB3Q9UKI3 123 aa10.54□□□□□ -0.72
TMEM260-201ENST00000261556 ARMS2P0C7Q2 107 aa10.54□□□□□ -0.72
TMEM260-201ENST00000261556 ZCCHC24Q8N2G6 241 aaKnown RBP10.54□□□□□ -0.72
TMEM260-201ENST00000261556 TANC2Q9HCD6 1990 aa10.54□□□□□ -0.72
TMEM260-201ENST00000261556 IGHV3OR16-10A0A075B7F0 116 aa10.54□□□□□ -0.72
TMEM260-201ENST00000261556 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
TMEM260-201ENST00000261556 FAM106CPP0CH98 169 aa10.53□□□□□ -0.72
TMEM260-201ENST00000261556 BSPH1Q075Z2 132 aa10.53□□□□□ -0.72
TMEM260-201ENST00000261556 FAM53AQ6NSI3 398 aaPredicted RBP10.53□□□□□ -0.72
TMEM260-201ENST00000261556 PINLYPA6NC86 204 aa10.53□□□□□ -0.72
TMEM260-201ENST00000261556 FOXI3A8MTJ6 420 aaPredicted RBP10.53□□□□□ -0.72
TMEM260-201ENST00000261556 LINC00305Q7Z4B0 112 aa10.53□□□□□ -0.72
TMEM260-201ENST00000261556 AMN1Q8IY45 258 aa10.53□□□□□ -0.72
TMEM260-201ENST00000261556 REPIN1Q9BWE0 567 aaKnown RBP10.53□□□□□ -0.72
TMEM260-201ENST00000261556 MALRD1Q5VYJ5 2156 aa10.53□□□□□ -0.72
TMEM260-201ENST00000261556 PLXNB3Q9ULL4 1909 aa10.53□□□□□ -0.72
TMEM260-201ENST00000261556 ZNF146Q15072 292 aa10.53□□□□□ -0.72
TMEM260-201ENST00000261556 ZNF295-AS1Q8N0V1 137 aa10.53□□□□□ -0.72
TMEM260-201ENST00000261556 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.53□□□□□ -0.72
TMEM260-201ENST00000261556 TEN1Q86WV5 123 aa10.53□□□□□ -0.72
TMEM260-201ENST00000261556 IGHV3-35A0A0C4DH35 117 aa10.52□□□□□ -0.73
TMEM260-201ENST00000261556 LY6EQ16553 131 aa10.52□□□□□ -0.73
TMEM260-201ENST00000261556 FAM216BQ8N7L0 139 aa10.52□□□□□ -0.73
TMEM260-201ENST00000261556 ABCA2Q9BZC7 2435 aa10.52□□□□□ -0.73
TMEM260-201ENST00000261556 HOXA4Q00056 320 aaPredicted RBP10.52□□□□□ -0.73
TMEM260-201ENST00000261556 MLANAQ16655 118 aa10.52□□□□□ -0.73
TMEM260-201ENST00000261556 LGALS9BQ3B8N2 356 aa10.52□□□□□ -0.73
TMEM260-201ENST00000261556 RPL39P5Q59GN2 51 aa10.52□□□□□ -0.73
TMEM260-201ENST00000261556 LGALS9CQ6DKI2 356 aa10.52□□□□□ -0.73
TMEM260-201ENST00000261556 VWA8A3KMH1 1905 aa10.52□□□□□ -0.73
TMEM260-201ENST00000261556 C11orf52Q96A22 123 aa10.52□□□□□ -0.73
TMEM260-201ENST00000261556 PKIGQ9Y2B9 76 aa10.52□□□□□ -0.73
TMEM260-201ENST00000261556 CEP350Q5VT06 3117 aa10.51□□□□□ -0.73
TMEM260-201ENST00000261556 TRAV3A0A0B4J244 114 aa10.51□□□□□ -0.73
TMEM260-201ENST00000261556 TRAV12-3A0A0B4J271 114 aa10.51□□□□□ -0.73
TMEM260-201ENST00000261556 HLA-DRB4P13762 266 aa10.51□□□□□ -0.73
TMEM260-201ENST00000261556 FOXG1P55316 489 aaPredicted RBP10.51□□□□□ -0.73
TMEM260-201ENST00000261556 HLA-DRB4X5D2U9 266 aa10.51□□□□□ -0.73
TMEM260-201ENST00000261556 LOC107984640A0A0U1RRK4 108 aa10.51□□□□□ -0.73
TMEM260-201ENST00000261556 J3KT08 172 aa10.51□□□□□ -0.73
TMEM260-201ENST00000261556 ANKRD29Q8N6D5 301 aa10.51□□□□□ -0.73
TMEM260-201ENST00000261556 DYNLRB2Q8TF09 96 aa10.51□□□□□ -0.73
TMEM260-201ENST00000261556 EFNA2O43921 213 aa10.51□□□□□ -0.73
TMEM260-201ENST00000261556 MYOD1P15172 320 aa10.51□□□□□ -0.73
TMEM260-201ENST00000261556 DCTN5Q9BTE1 182 aa10.51□□□□□ -0.73
TMEM260-201ENST00000261556 C12orf77C9JDV5 145 aa10.5□□□□□ -0.73
TMEM260-201ENST00000261556 SLC25A20O43772 301 aa10.5□□□□□ -0.73
TMEM260-201ENST00000261556 TFF1P04155 84 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms