RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 LRCOL1A6NCL2 159 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 C17orf98A8MV24 154 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 H0YJW9 148 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 IGLV2-23P01705 113 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 SFTA3P0C7M3 94 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 ADORA2A-AS1P86434 159 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 NDPQ00604 133 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 SPINK13Q1W4C9 94 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 COL5A1-AS1Q5SY13 56 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 PARLQ9H300 379 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 TRBV6-7A0A0A0MS04 114 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 A0A1W2PRE2 83 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 DUTP33316 252 aaKnown RBP3.25□□□□□ -1.89
RNF38-201ENST00000259605 PRB3Q04118 309 aaPredicted RBP3.25□□□□□ -1.89
RNF38-201ENST00000259605 GAGE6Q13070 117 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 RNF151Q2KHN1 245 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 DEFB135Q30KP9 77 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 LIME1Q9H400 295 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 hDV102S1A0JD36 115 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 NPIPB5A8MRT5 1133 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 H3BQ85 93 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 J3QL48 77 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 M0R2P5 195 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 NDUFA1O15239 70 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 SEC61GP60059 68 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 HGFACQ04756 655 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 CT83Q5H943 113 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 LINC00311Q8N616 119 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 WFDC11Q8NEX6 87 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 ZNRF2Q8NHG8 242 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 C8orf49Q96NF6 230 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 ATAD5Q96QE3 1844 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 LY6G6EA0A0G2JKS1 128 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 C9JQL5 133 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 IFITM3Q01628 133 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 SDHCQ99643 169 aaPredicted RBP3.24□□□□□ -1.89
RNF38-201ENST00000259605 C20orf144Q9BQM9 153 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 SMPXQ9UHP9 88 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 SNRNP200O75643 2136 aaKnown RBP3.24□□□□□ -1.89
RNF38-201ENST00000259605 SLURP1P55000 103 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 LYPD2Q6UXB3 125 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 LHFPL4Q7Z7J7 247 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 NRTNQ99748 197 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 MIXL1Q9H2W2 232 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 LINC00474Q9P2X8 69 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 EPDR1Q9UM22 224 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 C15orf62A8K5M9 175 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 IGKV1-5P01602 117 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 MIFP14174 115 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 SONP18583 2426 aaKnown RBP3.24□□□□□ -1.89
RNF38-201ENST00000259605 GAGE2BQ13066 116 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 PMVKQ15126 192 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 OTOGLQ3ZCN5 2332 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 UBR3Q6ZT12 1888 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 Q8NA96 180 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 PLPPR1Q8TBJ4 325 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 PRR25Q96S07 402 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 NOP10Q9NPE3 64 aaKnown RBP3.24□□□□□ -1.89
RNF38-201ENST00000259605 FAM215AQ9Y5M1 114 aa3.24□□□□□ -1.89
RNF38-201ENST00000259605 PATJQ8NI35 1801 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 LYRM9A8MSI8 78 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 FAM229AH3BQW9 127 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 FXYD1O00168 92 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 DDTP30046 118 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 FUSP35637 526 aaKnown RBP eCLIP3.23□□□□□ -1.89
RNF38-201ENST00000259605 UBE2D3P61077 147 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 CENPWQ5EE01 88 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 MBD6Q96DN6 1003 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 ZNF319Q9P2F9 582 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 USF3Q68DE3 2245 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 ARFGEF3Q5TH69 2177 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 SCN10AQ9Y5Y9 1956 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 TCF20Q9UGU0 1960 aaKnown RBP3.23□□□□□ -1.89
RNF38-201ENST00000259605 RNF222A6NCQ9 220 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 KNCNA6PVL3 124 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 CHKB-CPT1BH3BT56 60 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 LINC01551Q86U37 167 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 C5orf30Q96GV9 206 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 DERL1Q9BUN8 251 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 MRPS18AQ9NVS2 196 aaKnown RBP3.23□□□□□ -1.89
RNF38-201ENST00000259605 GPR179Q6PRD1 2367 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 MYH7P12883 1935 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 ARID1AO14497 2285 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 TRAV9-1A0A075B6T8 112 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 A0A1B0GV72 72 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 LAGE3Q14657 143 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 C9orf153Q5TBE3 101 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 TEX36Q5VZQ5 186 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 LSM4Q9Y4Z0 139 aaKnown RBP3.23□□□□□ -1.89
RNF38-201ENST00000259605 CACNA1AO00555 2505 aa3.23□□□□□ -1.89
RNF38-201ENST00000259605 TDRD6O60522 2096 aaKnown RBP3.23□□□□□ -1.89
RNF38-201ENST00000259605 HMX2A2RU54 273 aa3.22□□□□□ -1.89
RNF38-201ENST00000259605 I3L3M4 83 aa3.22□□□□□ -1.89
RNF38-201ENST00000259605 IGHV3-30P01768 117 aa3.22□□□□□ -1.89
RNF38-201ENST00000259605 IGHV3-33P01772 117 aa3.22□□□□□ -1.89
RNF38-201ENST00000259605 IGHV3-30-3P0DP02 117 aa3.22□□□□□ -1.89
RNF38-201ENST00000259605 IGHV3-30-5P0DP03 117 aa3.22□□□□□ -1.89
RNF38-201ENST00000259605 C5orf66Q9H5L9 145 aa3.22□□□□□ -1.89
RNF38-201ENST00000259605 TRBV5-7A0A0A0MS05 114 aa3.22□□□□□ -1.89
RNF38-201ENST00000259605 TNFRSF13BO14836 293 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms