RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 CAMPP49913 170 aa11.79□□□□□ -0.52
DDX49-201ENST00000247003 DSCR9P59020 149 aa11.79□□□□□ -0.52
DDX49-201ENST00000247003 LINC00322Q6ZN03 302 aaPredicted RBP11.79□□□□□ -0.52
DDX49-201ENST00000247003 RBPMS2Q6ZRY4 209 aaKnown RBP11.79□□□□□ -0.52
DDX49-201ENST00000247003 BCL6BQ8N143 479 aaPredicted RBP11.79□□□□□ -0.52
DDX49-201ENST00000247003 OR2D3Q8NGH3 330 aa11.79□□□□□ -0.52
DDX49-201ENST00000247003 KCNS1Q96KK3 526 aa11.79□□□□□ -0.52
DDX49-201ENST00000247003 FBLL1A6NHQ2 334 aaKnown RBP11.79□□□□□ -0.52
DDX49-201ENST00000247003 SH2D7A6NKC9 451 aaPredicted RBP11.79□□□□□ -0.52
DDX49-201ENST00000247003 G3V318 75 aa11.79□□□□□ -0.52
DDX49-201ENST00000247003 PRB1P04280 392 aa11.79□□□□□ -0.52
DDX49-201ENST00000247003 CLEC3BP05452 202 aa11.79□□□□□ -0.52
DDX49-201ENST00000247003 MSMBP08118 114 aa11.79□□□□□ -0.52
DDX49-201ENST00000247003 SLAQ13239 276 aa11.79□□□□□ -0.52
DDX49-201ENST00000247003 ZNF843Q8N446 348 aa11.79□□□□□ -0.52
DDX49-201ENST00000247003 ARL6IP6Q8N6S5 226 aa11.79□□□□□ -0.52
DDX49-201ENST00000247003 SIGLECL1Q8N7X8 197 aa11.79□□□□□ -0.52
DDX49-201ENST00000247003 MEGF9Q9H1U4 602 aa11.79□□□□□ -0.52
DDX49-201ENST00000247003 TRAV41A0A0B4J266 112 aa11.78□□□□□ -0.52
DDX49-201ENST00000247003 M0R3E3 92 aa11.78□□□□□ -0.52
DDX49-201ENST00000247003 RELQ04864 619 aaPredicted RBP11.78□□□□□ -0.52
DDX49-201ENST00000247003 A0A1B0GXF2 115 aa11.77□□□□□ -0.52
DDX49-201ENST00000247003 ATP5G2Q06055 141 aa11.77□□□□□ -0.52
DDX49-201ENST00000247003 C9orf152Q5JTZ5 239 aa11.77□□□□□ -0.52
DDX49-201ENST00000247003 TOMM20LQ6UXN7 152 aa11.77□□□□□ -0.52
DDX49-201ENST00000247003 CLEC19AQ6UXS0 136 aa11.77□□□□□ -0.52
DDX49-201ENST00000247003 ZC2HC1AQ96GY0 325 aa11.77□□□□□ -0.52
DDX49-201ENST00000247003 PGLYRP4Q96LB8 373 aa11.77□□□□□ -0.52
DDX49-201ENST00000247003 IGHV3-35A0A0C4DH35 117 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 FAM223BA6NKX1 122 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 F2Z2F3 143 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 LINC00310P59036 64 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 CTAG1AP78358 180 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 FAM223AQ8IWN6 122 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 NAGKQ9UJ70 344 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 TRAV20A0A0B4J274 112 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 B4DSR2 109 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 IGHV4-38-2P0DP08 117 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 DEFA6Q01524 100 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 GTSF1Q8WW33 167 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 CCDC140Q96MF4 163 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 NOL4LQ96MY1 436 aaPredicted RBP11.76□□□□□ -0.53
DDX49-201ENST00000247003 ATP6V0BQ99437 205 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 ZFAND3Q9H8U3 227 aa11.76□□□□□ -0.53
DDX49-201ENST00000247003 ABCA1O95477 2261 aa11.75□□□□□ -0.53
DDX49-201ENST00000247003 LINC01548A6NM66 108 aa11.75□□□□□ -0.53
DDX49-201ENST00000247003 ZNF785A8K8V0 405 aa11.75□□□□□ -0.53
DDX49-201ENST00000247003 M0QZK8 103 aa11.75□□□□□ -0.53
DDX49-201ENST00000247003 CHEK1O14757 476 aa11.75□□□□□ -0.53
DDX49-201ENST00000247003 RNF224P0DH78 156 aa11.75□□□□□ -0.53
DDX49-201ENST00000247003 AMTP48728 403 aa11.75□□□□□ -0.53
DDX49-201ENST00000247003 CRIP2P52943 208 aaPredicted RBP11.75□□□□□ -0.53
DDX49-201ENST00000247003 SAPCD1Q5SSQ6 148 aa11.75□□□□□ -0.53
DDX49-201ENST00000247003 BORCS7Q96B45 105 aa11.75□□□□□ -0.53
DDX49-201ENST00000247003 METTL26Q96S19 204 aa11.75□□□□□ -0.53
DDX49-201ENST00000247003 SSBP4Q9BWG4 385 aaPredicted RBP11.75□□□□□ -0.53
DDX49-201ENST00000247003 PRO1933Q9H354 126 aa11.75□□□□□ -0.53
DDX49-201ENST00000247003 IGHV3OR16-8A0A075B7F1 116 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 ZNF705FA8MVS1 300 aaPredicted RBP11.74□□□□□ -0.53
DDX49-201ENST00000247003 ZNF705DP0CH99 300 aaPredicted RBP11.74□□□□□ -0.53
DDX49-201ENST00000247003 ZNF705BP0CI00 300 aaPredicted RBP11.74□□□□□ -0.53
DDX49-201ENST00000247003 COX6B1P14854 86 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 SLC25A16P16260 332 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 PMCHP20382 165 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 GATA3P23771 443 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 Q6AWC8 147 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 C18orf32Q8TCD1 76 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 COL12A1Q99715 3063 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 FAM162BQ5T6X4 162 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 GDF5OSQ5U4N7 250 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 C16orf54Q6UWD8 224 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 PIFOQ8TCI5 191 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 SLC50A1Q9BRV3 221 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 NDFIP1Q9BT67 221 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 HIF1ANQ9NWT6 349 aa11.74□□□□□ -0.53
DDX49-201ENST00000247003 A0A087X0K7 114 aa11.73□□□□□ -0.53
DDX49-201ENST00000247003 H3BUX3 64 aa11.73□□□□□ -0.53
DDX49-201ENST00000247003 ZNF324O75467 553 aaPredicted RBP11.73□□□□□ -0.53
DDX49-201ENST00000247003 TRGV3P03979 118 aa11.73□□□□□ -0.53
DDX49-201ENST00000247003 GPX1P07203 203 aa11.73□□□□□ -0.53
DDX49-201ENST00000247003 DDTP30046 118 aa11.73□□□□□ -0.53
DDX49-201ENST00000247003 KLF5Q13887 457 aaPredicted RBP11.73□□□□□ -0.53
DDX49-201ENST00000247003 LY6EQ16553 131 aa11.73□□□□□ -0.53
DDX49-201ENST00000247003 Q6ZWC4 215 aa11.73□□□□□ -0.53
DDX49-201ENST00000247003 RCHY1Q96PM5 261 aa11.73□□□□□ -0.53
DDX49-201ENST00000247003 FAM208BQ5VWN6 2430 aa11.73□□□□□ -0.53
DDX49-201ENST00000247003 FLNCQ14315 2725 aa11.73□□□□□ -0.53
DDX49-201ENST00000247003 CHD6Q8TD26 2715 aa11.73□□□□□ -0.53
DDX49-201ENST00000247003 IGKV2-40A0A087WW87 121 aaPredicted RBP11.72□□□□□ -0.53
DDX49-201ENST00000247003 A0A1W2PS18 150 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 A8MWP6 167 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 HAX1O00165 279 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 BUB3O43684 328 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 IGKV2D-40P01614 121 aaPredicted RBP11.72□□□□□ -0.53
DDX49-201ENST00000247003 RIGQ13278 110 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 C1orf194Q5T5A4 169 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 SMAD5-AS1Q9Y6J3 95 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 ABCA2Q9BZC7 2435 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 A0A1B0GUT8 65 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 A0A1B0GW15 77 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms