RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Rnaseh2cQ9CQ18 166 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Tex43Q9D9I1 141 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 SnapinQ9Z266 136 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr465-ps1A0A0U1RPZ4 315 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Igkv4-51A0N8I8 119 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ifna6P07350 189 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Hoxa6P09092 232 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ube2kP61087 200 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Cdk2P97377 346 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gm9Q3UKW5 162 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Fam220aQ3ZN08 260 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Npy4rQ61041 375 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 EnkurQ6SP97 255 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Psg16Q8K0U8 395 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 C1qtnf4Q8R066 326 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Vmn1r226Q8R2A8 298 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Armc10Q9D0L7 306 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Dopey2Q3UHQ6 2295 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Tnfaip6O08859 275 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ndufb11O09111 151 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 P01806 116 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Hmx3P42581 356 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 NfybP63139 207 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Eif5aP63242 154 aaKnown RBP12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Rnase11Q5GAM9 192 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Foxf1Q61080 378 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 SepsecsQ6P6M7 504 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr484Q8VFD3 321 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Rer1Q9CQU3 196 aaKnown RBP12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gins3Q9CY94 216 aa12.14□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gm9195A0A140LHT4 2805 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Rpl23a-ps3A0A140T8M7 156 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Nudt10P0C027 164 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Nudt11P0C028 164 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Rpl23aP62751 156 aaKnown RBP12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Tgfbr1Q64729 503 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Zfp85Q7TMC9 473 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 TpppQ7TQD2 218 aaKnown RBP12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr193Q7TS43 309 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Slc35e1Q8CD26 409 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Mrpl51Q9CPY1 128 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Hint2Q9D0S9 163 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Sec11cQ9D8V7 192 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 LenepQ9WVB6 61 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gm45871A0A1B0GRI9 540 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gm9047B9EJX3 177 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ascl5M0QWB7 188 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 SncaO55042 140 aaKnown RBP12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 PomcP01193 235 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Tmem18Q3TUD9 140 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Wfdc8Q4KUS1 273 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Calm5Q6W3E0 140 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Rsl1Q7M6Y1 485 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr1509Q7TQQ0 308 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ifna13Q80SU4 189 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Stpg2Q8C8J0 561 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr1368Q8VFG3 314 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Rab40cQ8VHQ4 281 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 NanpQ9CPT3 248 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gins1Q9CZ15 196 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Cox20Q9D7J4 117 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 CutcQ9D8X1 272 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Cited4Q9WUL8 182 aa12.13□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gm21778A0A087WNP8 232 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ighv14-4A0A0A6YVR1 117 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 H60bB1B212 251 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr1154L7MU57 310 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Chek1O35280 476 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 SnrpeP62305 92 aaKnown RBP12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Zfp663Q6NXM6 656 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Stoml3Q6PE84 287 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr987Q7TRA2 309 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Q8BN57 294 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr206Q8VGP9 306 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Siglec12Q91Y57 467 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Epdr1Q99M71 224 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Q9DAZ5 108 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ighv5-17A0A075B5R1 117 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gm12887B1AVM1 119 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 SpxD3Z752 116 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gm10037E9PX85 104 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 PspnO70300 156 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Rab7aP51150 207 aaKnown RBP12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 AmelxP63277 210 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Q08AU9 97 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr1204Q7TR10 309 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr1297Q8VGE8 312 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Tmem205Q91XE8 189 aa12.12□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gm15127B1AVZ5 449 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gm15091B1AZM2 449 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Pet117P0DJF2 80 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Hspb7P35385 169 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 CebpdQ00322 268 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr323Q5NCD0 323 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gpr4Q8BUD0 365 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr362Q8VGV7 317 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Xrcc3Q9CXE6 349 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Znf22Q9ERU3 237 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ccl2P10148 148 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 ApohQ01339 345 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms