RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 FXYD2P54710 66 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 DEFA3P59666 94 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 NDUFA5Q16718 116 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 PXT1Q8NFP0 134 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 SLC25A40Q8TBP6 338 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 GNPDA2Q8TDQ7 276 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 C11orf40Q8WZ69 217 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 TMEM106AQ96A25 262 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 GINS4Q9BRT9 223 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 C8orf4Q9NR00 106 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 SLC39A9Q9NUM3 307 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 IL20Q9NYY1 176 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 STOML2Q9UJZ1 356 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 KIAA0100Q14667 2235 aaKnown RBP1.87□□□□□ -2.11
CLN5-212ENST00000636602 MALRD1Q5VYJ5 2156 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 NCKAP5O14513 1909 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 PVALEFA0A1B0GWK0 134 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 MEIS3P1A6NDR6 274 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 OR51F1A6NGY5 319 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 SIGLEC16A6NMB1 481 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 BUB1B-PAK6H3BSN5 160 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 OVOL1O14753 267 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 NAPSAO96009 420 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 ERP29P30040 261 aaKnown RBP1.86□□□□□ -2.11
CLN5-212ENST00000636602 PPP1R2P41236 205 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 PSMD8P48556 350 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 ZNF80P51504 273 aaPredicted RBP1.86□□□□□ -2.11
CLN5-212ENST00000636602 SNRPFP62306 86 aaKnown RBP1.86□□□□□ -2.11
CLN5-212ENST00000636602 DEFB103AP81534 67 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 PPP1R2P3Q6NXS1 205 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 C12orf45Q8N5I9 185 aaPredicted RBP1.86□□□□□ -2.11
CLN5-212ENST00000636602 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 ERGIC3Q9Y282 383 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 CDH23Q9H251 3354 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 LAMA2P24043 3122 aaKnown RBP1.86□□□□□ -2.11
CLN5-212ENST00000636602 PLXNA4Q9HCM2 1894 aa1.86□□□□□ -2.11
CLN5-212ENST00000636602 GREB1Q4ZG55 1949 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 TET1Q8NFU7 2136 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 ZNF860A6NHJ4 632 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 S100A4P26447 101 aaKnown RBP1.85□□□□□ -2.11
CLN5-212ENST00000636602 SERPINB9P50453 376 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 CDC42P60953 191 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 MIR17HGQ75NE6 70 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 ZNF720Q7Z2F6 126 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 WFDC11Q8NEX6 87 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 TERB2Q8NHR7 220 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 SPACA4Q8TDM5 124 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 CST9LQ9H4G1 147 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 ARMC1Q9NVT9 282 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 TVP23BQ9NYZ1 205 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 BAIAP2Q9UQB8 552 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 GINS2Q9Y248 185 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 LAMA3Q16787 3333 aa1.85□□□□□ -2.11
CLN5-212ENST00000636602 TSC2P49815 1807 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 TRANK1O15050 2925 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 RANBP2P49792 3224 aaKnown RBP1.84□□□□□ -2.11
CLN5-212ENST00000636602 ATG2AQ2TAZ0 1938 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 SULT1B1O43704 296 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 ZNF737O75373 536 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 OR2J2O76002 312 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 C1QCP02747 245 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 IGKV1-16P04430 117 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 METTL15P1P0C7V9 234 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 CASP1P29466 404 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 CD52P31358 61 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 S100A5P33763 92 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 G6PCP35575 357 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 KRTAP12-3P60328 96 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 DHRS4L2Q6PKH6 230 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 Q6Q795 121 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 DPPA3Q6W0C5 159 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 DEFB128Q7Z7B8 93 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 OR11H6Q8NGC7 330 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 OR8B3Q8NGG8 313 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 PFN4Q8NHR9 129 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 AP3S1Q92572 193 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 PRO3102Q9H379 93 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 CKLFQ9UBR5 152 aa1.84□□□□□ -2.11
CLN5-212ENST00000636602 XIRP2A4UGR9 3374 aa1.84□□□□□ -2.12
CLN5-212ENST00000636602 SPTBN5Q9NRC6 3674 aaKnown RBP1.84□□□□□ -2.12
CLN5-212ENST00000636602 SZT2Q5T011 3432 aa1.84□□□□□ -2.12
CLN5-212ENST00000636602 MYH10P35580 1976 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 PATJQ8NI35 1801 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 ARL5CA6NH57 179 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 CLDN25C9JDP6 229 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 SDCBPO00560 298 aaPredicted RBP1.83□□□□□ -2.12
CLN5-212ENST00000636602 C7orf65Q6ZTY9 151 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 GOLT1AQ6ZVE7 132 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 AAED1Q7RTV5 226 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 TRAPPC6BQ86SZ2 158 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 DHFR2Q86XF0 187 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 HIST3H2BBQ8N257 126 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 ZNF439Q8NDP4 499 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 OR52R1Q8NGF1 315 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 C2orf50Q96LR7 162 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 HSPB9Q9BQS6 159 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 PARVBQ9HBI1 364 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 PLXNA3P51805 1871 aa1.83□□□□□ -2.12
CLN5-212ENST00000636602 PTPRDP23468 1912 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 1073.3 ms