RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 BOKQ9UMX3 212 aaPredicted RBP0□□□□□ -2.41
ITGB5-213ENST00000608945 PRELID3BQ9Y3B1 194 aa0□□□□□ -2.41
ITGB5-213ENST00000608945 BDP1A6H8Y1 2624 aa-0□□□□□ -2.41
ITGB5-213ENST00000608945 BSNQ9UPA5 3926 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 KIF13BQ9NQT8 1826 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 RNF213Q63HN8 5207 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 KIAA1109Q2LD37 5005 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 NCOA1Q15788 1441 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 VWFP04275 2813 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 TRBV19A0A075B6N1 114 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 A0A087WSZ3 146 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 CST8O60676 142 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 IFNA7P01567 189 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 RPS17P08708 135 aaKnown RBP-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 RAB5CP51148 216 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 UBE2BP63146 152 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 PTRHD1Q6GMV3 140 aaKnown RBP-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 S100A7AQ86SG5 101 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 Q8TAT8 98 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 GGACTQ9BVM4 153 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 CCDC94Q9BW85 323 aaPredicted RBP-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 NPCDR1Q9BY65 106 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 NMNAT1Q9HAN9 279 aaPredicted RBP-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 PARVBQ9HBI1 364 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 NCOR1O75376 2440 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 COL7A1Q02388 2944 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 RALGAPA2Q2PPJ7 1873 aa-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 TEP1Q99973 2627 aaKnown RBP-0.01□□□□□ -2.41
ITGB5-213ENST00000608945 FAT4Q6V0I7 4981 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 COL12A1Q99715 3063 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 ARHGEF11O15085 1522 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 SYNE1Q8NF91 8797 aaKnown RBP-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 PIK3C2GO75747 1445 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 RYR3Q15413 4870 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 TENM4Q6N022 2769 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 MAST4O15021 2626 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 TRAV27A0A087WT01 109 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 A0A096LPI6 279 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 TRAV4A0A0B4J268 109 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 TAX1BP3O14907 124 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 HLA-EP13747 358 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 AESQ08117 197 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 EIF3IQ13347 325 aaKnown RBP-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 C1orf134Q5TEV5 83 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 ARPINQ7Z6K5 226 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 Q86TA4 180 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 OTUD6BQ8N6M0 293 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 PXT1Q8NFP0 134 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 OR5D16Q8NGK9 328 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 OR4K15Q8NH41 348 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 POP5Q969H6 163 aaKnown RBP-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 TEX37Q96LM6 180 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 ARL5AQ9Y689 179 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 RIF1Q5UIP0 2472 aaKnown RBP-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 CNTRLQ7Z7A1 2325 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 HECW2Q9P2P5 1572 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 POLQO75417 2590 aa-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 SETD2Q9BYW2 2564 aaPredicted RBP-0.02□□□□□ -2.41
ITGB5-213ENST00000608945 ZANQ9Y493 2812 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 TAF1LQ8IZX4 1826 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 LYPLA2O95372 231 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 CD14P08571 375 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 FXYD4P59646 89 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 OCIAD2Q56VL3 154 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 LINC00299Q6ZSB3 139 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 IFT20Q8IY31 132 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 LRRC18Q8N456 261 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 PLAC4Q8WY50 150 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 CHCHD1Q96BP2 118 aaKnown RBP-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 PPP1R14BQ96C90 147 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 HYLS1Q96M11 299 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 ZNF714Q96N38 554 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 SIGMAR1Q99720 223 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 UCK1Q9HA47 277 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 OTOGQ6ZRI0 2925 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 EML5Q05BV3 1969 aa-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 FLNAP21333 2647 aaKnown RBP-0.03□□□□□ -2.41
ITGB5-213ENST00000608945 HMCN2Q8NDA2 5059 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 PTPN13Q12923 2485 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 EP300Q09472 2414 aaPredicted RBP-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 ADCY9O60503 1353 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 HECW1Q76N89 1606 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 HAND1O96004 215 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 TCRBP04435 133 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 ATP5G3P48201 142 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 SERPINB9P50453 376 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 DYNLT3P51808 116 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 LIN52Q52LA3 116 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 PRR15Q8IV56 129 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 ARL5BQ96KC2 179 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 CCL19Q99731 98 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 FAM32AQ9Y421 112 aaKnown RBP-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 PDZD2O15018 2839 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 BCL9O00512 1426 aa-0.04□□□□□ -2.42
ITGB5-213ENST00000608945 ABCA13Q86UQ4 5058 aa-0.05□□□□□ -2.42
ITGB5-213ENST00000608945 RFX7Q2KHR2 1363 aa-0.05□□□□□ -2.42
ITGB5-213ENST00000608945 HERC1Q15751 4861 aa-0.05□□□□□ -2.42
ITGB5-213ENST00000608945 B4DSR2 109 aa-0.05□□□□□ -2.42
ITGB5-213ENST00000608945 TMEM256-PLSCR3K7ERE1 68 aa-0.05□□□□□ -2.42
ITGB5-213ENST00000608945 HMGB3O15347 200 aaKnown RBP-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms