RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 LINC00526Q96FQ7 95 aa3.65□□□□□ -1.83
PAF1-208ENST00000598594 VGLL1Q99990 258 aa3.65□□□□□ -1.83
PAF1-208ENST00000598594 DEFB126Q9BYW3 111 aa3.65□□□□□ -1.83
PAF1-208ENST00000598594 C11orf1Q9H5F2 150 aa3.65□□□□□ -1.83
PAF1-208ENST00000598594 AP4S1Q9Y587 144 aa3.65□□□□□ -1.83
PAF1-208ENST00000598594 ZC3H13Q5T200 1668 aaKnown RBP3.65□□□□□ -1.83
PAF1-208ENST00000598594 ABCC3O15438 1527 aa3.65□□□□□ -1.83
PAF1-208ENST00000598594 TNRC6AQ8NDV7 1962 aaKnown RBP3.64□□□□□ -1.83
PAF1-208ENST00000598594 C3orf85A0A1B0GTC6 90 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 A6NED7 52 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 A8MWP4 228 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 H3BT86 120 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 HRASP01112 189 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 IGHV3-7P01780 117 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 HLA-DQA1P01909 254 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 TRGV3P03979 118 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 P0C879 139 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 NTM-AS1Q6ZSK4 140 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 SIGLECL1Q8N7X8 197 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 C15orf56Q8N910 161 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 Q8N976 141 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 OTOSQ8NHW6 89 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 CIRBP-AS1Q8TBR5 109 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 DIRC1Q969H9 104 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 RAB37Q96AX2 223 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 C16orf74Q96GX8 76 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 MCEEQ96PE7 176 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 SCGB3A1Q96QR1 104 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 LITAFQ99732 161 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 SLC35B3Q9H1N7 401 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 ATG5Q9H1Y0 275 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 ZNF646O15015 1829 aaPredicted RBP3.64□□□□□ -1.83
PAF1-208ENST00000598594 FYCO1Q9BQS8 1478 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 ANK1P16157 1881 aa3.64□□□□□ -1.83
PAF1-208ENST00000598594 NYNRINQ9P2P1 1898 aaKnown RBP3.64□□□□□ -1.83
PAF1-208ENST00000598594 COL18A1P39060 1754 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 ZNF407Q9C0G0 2248 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 PLXNA3P51805 1871 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 ROBO1Q9Y6N7 1651 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.63□□□□□ -1.83
PAF1-208ENST00000598594 OOSP1A8MZH6 123 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 MCRIP1C9JLW8 97 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 TMEM262E9PQX1 116 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 C3orf84H3BNL1 204 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 RPL36A-HNRNPH2H7BZ11 118 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 OR1I1O60431 355 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 IGKV1D-33P01593 117 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 IGKV1-33P01594 117 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 IGHV4-34P06331 123 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 IGLC1P0CG04 106 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 IGHV3-30-3P0DP02 117 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 SLC25A16P16260 332 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 FXYD7P58549 80 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 NOXRED1Q6NXP6 359 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 ZFP2Q6ZN57 461 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 C10orf111Q8N326 155 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 CNEP1R1Q8N9A8 125 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 LINC00052Q96N35 136 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 SAR1AQ9NR31 198 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 BET1LQ9NYM9 111 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 SERP1Q9Y6X1 66 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 NACAE9PAV3 2078 aa3.63□□□□□ -1.83
PAF1-208ENST00000598594 CCDC88BA6NC98 1476 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 RGPD3A6NKT7 1758 aaPredicted RBP3.62□□□□□ -1.83
PAF1-208ENST00000598594 IGKV3D-20A0A0C4DH25 116 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 A0A1W2PP18 115 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 ZFP92A6NM28 416 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 SLC25A20O43772 301 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 MRPS14O60783 128 aaKnown RBP3.62□□□□□ -1.83
PAF1-208ENST00000598594 TRACP01848 142 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 RBP4P02753 201 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 CD3DP04234 171 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 LINC00032P0C843 101 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 CRYGAP11844 174 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 ETV6P41212 452 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 LSM3P62310 102 aaKnown RBP3.62□□□□□ -1.83
PAF1-208ENST00000598594 EBI3Q14213 229 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 Q1RN00 199 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 C10orf91Q5T1B1 145 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 C16orf47Q6ZP98 133 aaPredicted RBP3.62□□□□□ -1.83
PAF1-208ENST00000598594 OR5AK2Q8NH90 309 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 AQP10Q96PS8 301 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 PKMYT1Q99640 499 aa3.62□□□□□ -1.83
PAF1-208ENST00000598594 MAGI2Q86UL8 1455 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 IGKV6D-41A0A0C4DH26 115 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 IGHV1-3A0A0C4DH29 117 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 A0A0D9SG52 128 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 KLF18A0A0U1RQI7 1052 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 C7orf66A4D0T2 115 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 LECT2O14960 151 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 PITX3O75364 302 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 IGLV2-11P01706 119 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 TRAPPC2P0DI81 140 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 TRAPPC2BP0DI82 140 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 CCL5P13501 91 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 HMGA2P52926 109 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 CDK5R1Q15078 307 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 ZNF720Q7Z2F6 126 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 C3orf56Q8N813 242 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 LSM10Q969L4 123 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms