RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 RTL8BQ17RB0 113 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 TMEM183BQ1AE95 376 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 TBC1D28Q2M2D7 210 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 HLA-DRB5Q30154 266 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 TDRG1Q3Y452 100 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 FBXW9Q5XUX1 488 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 LRP11Q86VZ4 500 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 LINC01561Q8N1V8 128 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 SIGLECL1Q8N7X8 197 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 TMEM105Q8N8V8 129 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 CSNK1G2-AS1Q8NCQ2 148 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 OR2D3Q8NGH3 330 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 OR5B3Q8NH48 314 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 MRAPQ8TCY5 172 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 ORAOV1Q8WV07 137 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 NRGNQ92686 78 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 APH1AQ96BI3 265 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 RCHY1Q96PM5 261 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 MGST2Q99735 147 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 HSPB9Q9BQS6 159 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 VAMP8Q9BV40 100 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 GGTLC1Q9BX51 225 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 OCR1Q9BZK8 76 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 OR2J1Q9GZK6 312 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 ZDHHC11Q9H8X9 412 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 CBLN4Q9NTU7 201 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 SIGLEC8Q9NYZ4 499 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 MRPL27Q9P0M9 148 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 MRPS16Q9Y3D3 137 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 V9GYV3 84 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 ZDBF2Q9HCK1 2354 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 BAHCC1Q9P281 2608 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 MYO9BQ13459 2157 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 SHANK1Q9Y566 2161 aa2.9□□□□□ -1.94
SMCHD1-208ENST00000583344 TRAV38-1A0A0B4J264 116 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 A0A1W2PRE2 83 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 K7EN84 100 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 K7EP13 123 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 FCN1O00602 326 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 RS1O15537 224 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF253O75346 499 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 SERF1AO75920 110 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 IGLV2-8P01709 118 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 IGHV3-9P01782 118 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 HLA-DQA1P01909 254 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 ARL14EPLP0DKL9 152 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 TDGF1P13385 188 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 G0S2P27469 103 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 UQCRFS1P47985 274 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 REG1BP48304 166 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 PPOXP50336 477 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 EDDM3BP56851 147 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 RPS20P60866 119 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 ERVK-16P61578 105 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 RPL31P62899 125 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 PSG7Q13046 419 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 RAB31Q13636 194 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 PMCHL1Q16048 86 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 RPEL1Q2QD12 228 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 MORN2Q502X0 79 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 ACP7Q6ZNF0 438 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 TMEM136Q6ZRR5 245 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 FAM231DQ6ZW35 169 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 TCF23Q7RTU1 214 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 MDP1Q86V88 176 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 BAGE3Q86Y29 109 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 BAGE2Q86Y30 109 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF439Q8NDP4 499 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 OR5T1Q8NG75 326 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 VN1R17PQ8TDU5 208 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 SLC35E1Q96K37 410 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 WFIKKN1Q96NZ8 548 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 DERL1Q9BUN8 251 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 OR2D2Q9H210 308 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 PATZ1Q9HBE1 687 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 TMEM167BQ9NRX6 74 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 UQCR10Q9UDW1 63 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 JPT1Q9UK76 154 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 TBL2Q9Y4P3 447 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 YTHDF2Q9Y5A9 579 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 GON4LQ3T8J9 2241 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 SPTBN4Q9H254 2564 aa2.9□□□□□ -1.95
SMCHD1-208ENST00000583344 NCKAP5O14513 1909 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 WDFY4Q6ZS81 3184 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 A0A1B0GUS0 222 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 GRIFINA4D1Z8 144 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 IZUMO1RA6ND01 250 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 DPRXA6NFQ7 191 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 FAM166BA8MTA8 275 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 HSBP1L1C9JCN9 74 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 INS-IGF2F8WCM5 200 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 KLRC4-KLRK1H3BQV0 150 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 SLC17A3O00476 420 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 HYPMO75409 117 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 FOXH1O75593 365 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 LY6G6DO95868 133 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 IGHG3P01860 377 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 C3orf79P0CE67 100 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 CBLN1P23435 193 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms