RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 AGFG2O95081 481 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 RBM3P98179 157 aaKnown RBP5.8□□□□□ -1.48
CNOT1-216ENST00000569240 Q6ZUT4 128 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 WFDC3Q8IUB2 231 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 TMEM14BQ9NUH8 114 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 V9GYY9 64 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 PRR20EP86478 221 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 PRR20CP86479 221 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 PRR20DP86480 221 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 PRR20BP86481 221 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 PRR20AP86496 221 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 ZFP36L1Q07352 338 aaKnown RBP5.79□□□□□ -1.48
CNOT1-216ENST00000569240 FOXC1Q12948 553 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 ALKBH6Q3KRA9 238 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 ZNF826PQ6ZT77 177 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 GREB1LQ9C091 1923 aaPredicted RBP5.79□□□□□ -1.48
CNOT1-216ENST00000569240 SAP30O75446 220 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 GFRALQ6UXV0 394 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 MRPL53Q96EL3 112 aaKnown RBP5.79□□□□□ -1.48
CNOT1-216ENST00000569240 TRAV12-3A0A0B4J271 114 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 LINC01619G3V211 115 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 KHDC1LQ5JSQ8 128 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 THAP8Q8NA92 274 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 ARMS2P0C7Q2 107 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 IGHV5-10-1A0A0J9YXX1 117 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 NDUFC1O43677 76 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 LTAP01374 205 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 LINC01620Q4KN68 170 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 ZNF831Q5JPB2 1677 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 IGHG2P01859 326 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 CDPF1Q6NVV7 123 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 TRPM6Q9BX84 2022 aa5.79□□□□□ -1.48
CNOT1-216ENST00000569240 IGHV3-21A0A0B4J1V1 117 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 TRAV13-1A0A0B4J241 112 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 TCF15Q12870 199 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 TMEM243Q9BU79 118 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 Q6P435 159 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 Q6ZSR3 168 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 J3QQQ9 107 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 GATA2P23769 480 aaPredicted RBP5.78□□□□□ -1.48
CNOT1-216ENST00000569240 FOXG1P55316 489 aaPredicted RBP5.78□□□□□ -1.48
CNOT1-216ENST00000569240 FHL1Q13642 323 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 MRPL51Q4U2R6 128 aaKnown RBP5.78□□□□□ -1.48
CNOT1-216ENST00000569240 TM2D2Q9BX73 214 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 TMEM133Q9H2Q1 129 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 YPEL4Q96NS1 127 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 H3BTX0 84 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 ITGBL1O95965 494 aaPredicted RBP5.78□□□□□ -1.48
CNOT1-216ENST00000569240 RNASE1P07998 156 aaKnown RBP5.78□□□□□ -1.48
CNOT1-216ENST00000569240 COX6A1P12074 109 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 Q6ZRM9 215 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 RBAKDNA6NC62 111 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 E9PLD3 99 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 JMJD7-PLA2G4BH0Y9G9 81 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 PF4P02776 101 aa5.78□□□□□ -1.48
CNOT1-216ENST00000569240 A0A0G2JMZ2 1700 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 LRRC37A2A6NM11 1700 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 LRRC37AA6NMS7 1700 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 PSG7Q13046 419 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 RGPD3A6NKT7 1758 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-216ENST00000569240 RGPD4Q7Z3J3 1758 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 LYRM9A8MSI8 78 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 IGLV3-19P01714 112 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 MRPS36P82909 103 aaKnown RBP5.77□□□□□ -1.49
CNOT1-216ENST00000569240 COLCA1Q6ZS62 124 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 MRPL35Q9NZE8 188 aaKnown RBP5.77□□□□□ -1.49
CNOT1-216ENST00000569240 CTRLP40313 264 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 CXCL5P42830 114 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 UNQ6494/PRO21346Q6UXR6 183 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 TAF1P21675 1872 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 TRBV19A0A075B6N1 114 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 SPINK14Q6IE38 97 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 NEU4Q8WWR8 484 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-216ENST00000569240 RCHY1Q96PM5 261 aa5.77□□□□□ -1.49
CNOT1-216ENST00000569240 ZNF474Q6S9Z5 364 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-216ENST00000569240 MRPL55Q7Z7F7 128 aaKnown RBP5.77□□□□□ -1.49
CNOT1-216ENST00000569240 CTSBP07858 339 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 MINOS1Q5TGZ0 78 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 PEAR1Q5VY43 1037 aaPredicted RBP5.76□□□□□ -1.49
CNOT1-216ENST00000569240 GTSF1Q8WW33 167 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 FAM110AQ9BQ89 295 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 MINOS1-NBL1R4GNA1 71 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 A0A0G2JRQ6 117 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 A0A1B0GUS0 222 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 NCR2O95944 276 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 IGLV3-1P01715 115 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 JPT2Q9H910 190 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 IGKV1-27A0A075B6S5 117 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 DTX2Q86UW9 622 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 ARID2Q68CP9 1835 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 TRBV7-1A0A0A6YYK4 115 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 IGKV1D-33P01593 117 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 IGKV1-33P01594 117 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 RPL36AP83881 106 aaKnown RBP5.76□□□□□ -1.49
CNOT1-216ENST00000569240 RPL36ALQ969Q0 106 aaKnown RBP5.76□□□□□ -1.49
CNOT1-216ENST00000569240 TMEM92Q6UXU6 159 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 C3orf22Q8N5N4 141 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 LSM4Q9Y4Z0 139 aaKnown RBP5.76□□□□□ -1.49
CNOT1-216ENST00000569240 FAM236AA0A1B0GUQ0 79 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 FAM236BA0A1B0GV22 79 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 245.1 ms