RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 GADD45AP24522 165 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 SUMO2P61956 95 aaKnown RBP3.57□□□□□ -1.84
HERC1-213ENST00000561359 SSX1Q16384 188 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 MAJINQ3KP22 176 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 Q499Y3 187 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 ATRAIDQ6UW56 229 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 UQCC3Q6UW78 93 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 ARRDC1Q8N5I2 433 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 ZNF709Q8N972 641 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 OR4B1Q8NGF8 309 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 PRSS3P2Q8NHM4 247 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 DTD1Q8TEA8 209 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 METTL26Q96S19 204 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 HSD17B10Q99714 261 aaKnown RBP3.57□□□□□ -1.84
HERC1-213ENST00000561359 TXN2Q99757 166 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 CCDC90BQ9GZT6 254 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 GABARAPL1Q9H0R8 117 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 SLC35B3Q9H1N7 401 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 KCNK15Q9H427 330 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 TRAV9-2A0A087WT02 112 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 TRBV5-5A0A0J9YX44 114 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 FAM240BA0A1B0GVZ2 78 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 PTGES3LE9PB15 166 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 INMT-MINDY4F8WBC2 141 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 UPK2O00526 184 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 PSCAO43653 123 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 ATG12O94817 140 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 NXPH4O95158 308 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 CFDP00746 253 aaPredicted RBP3.56□□□□□ -1.84
HERC1-213ENST00000561359 APOC3P02656 99 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 ANXA7P20073 488 aaKnown RBP3.56□□□□□ -1.84
HERC1-213ENST00000561359 BRWD1-AS2P59051 145 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 DEFB1P60022 68 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 RAB2AP61019 212 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 UNC119Q13432 240 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 OPCMLQ14982 345 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 ACSM3Q53FZ2 586 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 C10orf91Q5T1B1 145 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 GDF5OSQ5U4N7 250 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 MEDAGQ5VYS4 303 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 Q6ZSA8 131 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 SCXQ7RTU7 201 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 TMEM17Q86X19 198 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 H1FOOQ8IZA3 346 aaPredicted RBP3.56□□□□□ -1.84
HERC1-213ENST00000561359 SPAG16Q8N0X2 631 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 OR1L8Q8NGR8 309 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 MAFIPQ8WZ33 124 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 LSM10Q969L4 123 aaKnown RBP3.56□□□□□ -1.84
HERC1-213ENST00000561359 PINX1Q96BK5 328 aaKnown RBP3.56□□□□□ -1.84
HERC1-213ENST00000561359 SMIM19Q96E16 107 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 ARHGAP5-AS1Q96IT6 56 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 SOSTQ9BQB4 213 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 URM1Q9BTM9 101 aaKnown RBP3.56□□□□□ -1.84
HERC1-213ENST00000561359 MED28Q9H204 178 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 TAS2R8Q9NYW2 309 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 MSRB1Q9NZV6 116 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 KCNIP3Q9Y2W7 256 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 ORC6Q9Y5N6 252 aa3.56□□□□□ -1.84
HERC1-213ENST00000561359 A0A0U1RQV1 116 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 TEX50A0A1B0GTY4 177 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 A0A1B0GU03 582 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 C1orf196B1AJZ1 125 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 SMLR1H3BR10 107 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 I3L2K1 104 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 LYRM1O43325 122 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 MED6O75586 246 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 DIRAS3O95661 229 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 MT-CO2P00403 227 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 FCGR3AP08637 254 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 SULT1A3P0DMM9 295 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 SULT1A4P0DMN0 295 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 CD37P11049 281 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 CRYBB3P26998 211 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 MAPK3P27361 379 aaPredicted RBP3.55□□□□□ -1.84
HERC1-213ENST00000561359 NKX2-1P43699 371 aaPredicted RBP3.55□□□□□ -1.84
HERC1-213ENST00000561359 NPBWR1P48145 328 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 RORCP51449 518 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 PKIAP61925 76 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 PSG9Q00887 426 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 ST3GAL4Q11206 333 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 RNASE10Q5GAN6 216 aaKnown RBP3.55□□□□□ -1.84
HERC1-213ENST00000561359 HACD4Q5VWC8 232 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 SVBPQ8N300 66 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 Q8N9P0 234 aaPredicted RBP3.55□□□□□ -1.84
HERC1-213ENST00000561359 OR11H7Q8NGC8 314 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 OR11H4Q8NGC9 324 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 OR10J6PQ8NGY7 276 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 OR1P1Q8NH06 330 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 GGACTQ9BVM4 153 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 PECRQ9BY49 303 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 LPAR5Q9H1C0 372 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 SLC25A32Q9H2D1 315 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 AMBNQ9NP70 447 aa3.55□□□□□ -1.84
HERC1-213ENST00000561359 TMEM218A2RU14 115 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 FABP12A6NFH5 140 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 TMEM14DPA8MWL7 114 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 OGG1O15527 345 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 IGLV2-8P01709 118 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 NQO2P16083 231 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 NFYAP23511 347 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms