RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CHCHD1Q96BP2 118 aaKnown RBP1.34□□□□□ -2.19
RTF1-207ENST00000561076 CIB3Q96Q77 187 aaPredicted RBP1.34□□□□□ -2.19
RTF1-207ENST00000561076 GFRA4Q9GZZ7 299 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 BCL2L10Q9HD36 194 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 RPS10P5Q9NQ39 176 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 SAR1AQ9NR31 198 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 TPRKBQ9Y3C4 175 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 RNF11Q9Y3C5 154 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 ERVK-7P63135 1459 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 FYCO1Q9BQS8 1478 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 NAV1Q8NEY1 1877 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 KIF26BQ2KJY2 2108 aa1.34□□□□□ -2.2
RTF1-207ENST00000561076 SLIT1O75093 1534 aa1.34□□□□□ -2.2
RTF1-207ENST00000561076 MAP3K1Q13233 1512 aa1.34□□□□□ -2.2
RTF1-207ENST00000561076 ASXL1Q8IXJ9 1541 aa1.34□□□□□ -2.2
RTF1-207ENST00000561076 SAMD9LQ8IVG5 1584 aa1.34□□□□□ -2.2
RTF1-207ENST00000561076 NOTCH4Q99466 2003 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 RIC1Q4ADV7 1423 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 COL5A2P05997 1499 aaPredicted RBP1.33□□□□□ -2.2
RTF1-207ENST00000561076 C1orf167Q5SNV9 1468 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 CCDC18Q5T9S5 1454 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 PRXQ9BXM0 1461 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 MYO5CQ9NQX4 1742 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 TRAV7A0A075B6U4 112 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 TRAV27A0A087WT01 109 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 PIGBOS1A0A0B4J2F0 54 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 IGKV1-9A0A0C4DH69 117 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 TRBV10-2A0A0K0K1G8 114 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 MDFIC2A0A1B0GVS7 189 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 TMEM218A2RU14 115 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 C19orf71A6NCJ1 209 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 C11orf86A6NJI1 115 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 KRTAP29-1A8MX34 341 aaPredicted RBP1.33□□□□□ -2.2
RTF1-207ENST00000561076 ZNF670-ZNF695F2Z2N8 137 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 C17orf112F2Z3M2 114 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 CORTO00230 105 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 HBDP02042 147 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 TCRAP04437 139 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 TRGC1P0CF51 173 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 LINC00694P0DN24 101 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 PYYP10082 97 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 HLA-DRB4P13762 266 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 FABP4P15090 132 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 ZNF93P35789 620 aaPredicted RBP1.33□□□□□ -2.2
RTF1-207ENST00000561076 ETV6P41212 452 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 TPPP2P59282 170 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 GNG2P59768 71 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 DYNLT1P63172 113 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 SUPT4H1P63272 117 aaKnown RBP1.33□□□□□ -2.2
RTF1-207ENST00000561076 ERHP84090 104 aaKnown RBP1.33□□□□□ -2.2
RTF1-207ENST00000561076 CIRBPQ14011 172 aaKnown RBP1.33□□□□□ -2.2
RTF1-207ENST00000561076 LPAL2Q16609 132 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 TMEM155Q4W5P6 130 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 Q5W150 140 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 HAGHLQ6PII5 290 aaPredicted RBP1.33□□□□□ -2.2
RTF1-207ENST00000561076 TMEM14EPQ6UXP3 125 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 C7orf65Q6ZTY9 151 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 PHF5AQ7RTV0 110 aaKnown RBP1.33□□□□□ -2.2
RTF1-207ENST00000561076 RNF182Q8N6D2 247 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.33□□□□□ -2.2
RTF1-207ENST00000561076 MAPK1IP1LQ8NDC0 245 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 OR5AK2Q8NH90 309 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 PFN4Q8NHR9 129 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 MUC7Q8TAX7 377 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 KLF14Q8TD94 323 aaPredicted RBP1.33□□□□□ -2.2
RTF1-207ENST00000561076 AQP3Q92482 292 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 CARD19Q96LW7 228 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 COMMD3Q9UBI1 195 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 HHLA3Q9XRX5 114 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 HLA-DRB4X5D2U9 266 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 EFCAB6Q5THR3 1501 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 KIDINS220Q9ULH0 1771 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 SAMD9Q5K651 1589 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 GTF3C1Q12789 2109 aa1.33□□□□□ -2.2
RTF1-207ENST00000561076 LRP4O75096 1905 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 LOXHD1Q8IVV2 1947 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 DICER1Q9UPY3 1922 aaKnown RBP1.32□□□□□ -2.2
RTF1-207ENST00000561076 CTTNBP2Q8WZ74 1663 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 ARHGAP31Q2M1Z3 1444 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 SPATA31E1Q6ZUB1 1445 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 STRCP1A6NGW2 1772 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 SLIT2O94813 1529 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 DLC1Q96QB1 1528 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 SYCP2Q9BX26 1530 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 VIRMAQ69YN4 1812 aaKnown RBP1.32□□□□□ -2.2
RTF1-207ENST00000561076 IGKV2D-24A0A075B6R9 120 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 IGKV1D-37A0A075B6S9 117 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 IGHV3-15A0A0B4J1V0 119 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 A0A0D9SEW6 157 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 HMSDA8MTL9 139 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 A8MUU9 505 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 ZNF736B4DX44 427 aaPredicted RBP1.32□□□□□ -2.2
RTF1-207ENST00000561076 M0R143 59 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 M0R233 179 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 GNRH2O43555 120 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 IFNA17P01571 189 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 TRACP01848 142 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 SAA1P0DJI8 122 aaPredicted RBP1.32□□□□□ -2.2
RTF1-207ENST00000561076 MGST1P10620 155 aaKnown RBP1.32□□□□□ -2.2
RTF1-207ENST00000561076 MT3P25713 68 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms