RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 H1FOOQ8IZA3 346 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-228ENST00000554592 C6orf223Q8N319 242 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 TOMM5Q8N4H5 51 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 CSNK1G2-AS1Q8NCQ2 148 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 OR56B1Q8NGI3 324 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 OR4S2Q8NH73 311 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 OR10C1Q96KK4 312 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 HSD17B10Q99714 261 aaKnown RBP3.42□□□□□ -1.86
ATXN3-228ENST00000554592 COMMD5Q9GZQ3 224 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 MS4A6AQ9H2W1 248 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 MED9Q9NWA0 146 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 BET1LQ9NYM9 111 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 EXTL2Q9UBQ6 330 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 SCP2D1Q9UJQ7 156 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 SPATA2Q9UM82 520 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 CELA1Q9UNI1 258 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 RBMX2Q9Y388 322 aaKnown RBP3.42□□□□□ -1.86
ATXN3-228ENST00000554592 V9GY05 133 aa3.42□□□□□ -1.86
ATXN3-228ENST00000554592 IGHV3-49A0A0A0MS15 119 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 NBDYA0A0U1RRE5 68 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 IGLC7A0M8Q6 106 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 IFITM5A6NNB3 132 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 SNRPGP15A8MWD9 76 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 UPK2O00526 184 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 NUPL2O15504 423 aaKnown RBP3.41□□□□□ -1.86
ATXN3-228ENST00000554592 SCGNO76038 276 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 TCRBP04435 133 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 IL5P05113 134 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 EIF4EP06730 217 aaKnown RBP3.41□□□□□ -1.86
ATXN3-228ENST00000554592 FCGR3AP08637 254 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 CTXN2P0C2S0 81 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 SULT1A3P0DMM9 295 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 SULT1A4P0DMN0 295 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 OR13C7P0DN81 318 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 ELK1P19419 428 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 RCVRNP35243 200 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 NKX2-5P52952 324 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-228ENST00000554592 OR10A3P58181 314 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 RAB14P61106 215 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 DHODHQ02127 395 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 Q56UQ5 140 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 OR2B11Q5JQS5 317 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 CLLU1Q5K131 121 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 Q6ZS49 121 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 SAMD12Q8N8I0 201 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 UBAC2Q8NBM4 344 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 OR4D10Q8NGI6 311 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 SUN5Q8TC36 379 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 LGALS14Q8TCE9 139 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 TCTEX1D2Q8WW35 142 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 TXN2Q99757 166 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 FNDC4Q9H6D8 234 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-228ENST00000554592 VSIRQ9H7M9 311 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 HRASLSQ9HDD0 168 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 CLEC5AQ9NY25 188 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 TAS2R8Q9NYW2 309 aa3.41□□□□□ -1.86
ATXN3-228ENST00000554592 IGHV3OR16-13A0A075B7E8 117 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 IGHV3-21A0A0B4J1V1 117 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 IGHV3-74A0A0B4J1X5 117 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 TEX50A0A1B0GTY4 177 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 TEX48A0A1B0GUV7 120 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 TMEM189A5PLL7 270 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 SMIM9A6NGZ8 99 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 GABARAPH6UMI1 98 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 SLC17A2O00624 439 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 SERPINE2P07093 398 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 FAUP35544 74 aaKnown RBP3.4□□□□□ -1.87
ATXN3-228ENST00000554592 HTR2BP41595 481 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 NUTF2P61970 127 aaKnown RBP3.4□□□□□ -1.87
ATXN3-228ENST00000554592 EIF4EBP1Q13541 118 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-228ENST00000554592 RAB11BQ15907 218 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 HES5Q5TA89 166 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 TEX261Q6UWH6 196 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 LYPD1Q8N2G4 141 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 C9orf62Q8N4C0 152 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 FAM24BQ8N5W8 94 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 OR10W1Q8NGF6 305 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 ZNF431Q8TF32 576 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-228ENST00000554592 SMIM4Q8WVI0 70 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 MAFIPQ8WZ33 124 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 RAB3CQ96E17 227 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 ZNF414Q96IQ9 312 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 GINS3Q9BRX5 216 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 TMEM231Q9H6L2 316 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 GPN1Q9HCN4 374 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-228ENST00000554592 RABAC1Q9UI14 185 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 RAB22AQ9UL26 194 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 AK6Q9Y3D8 172 aaKnown RBP3.4□□□□□ -1.87
ATXN3-228ENST00000554592 HSPB11Q9Y547 144 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 F11RQ9Y624 299 aaKnown RBP3.4□□□□□ -1.87
ATXN3-228ENST00000554592 U3KQ87 197 aa3.4□□□□□ -1.87
ATXN3-228ENST00000554592 DMBT1Q9UGM3 2413 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-228ENST00000554592 A0A0A6YYH2 397 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 TRAV3A0A0B4J244 114 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 LINC00854A0A1B0GVQ3 168 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 A6NJ64 397 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 KNCNA6PVL3 124 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 HMSDA8MTL9 139 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 K7EIM0 57 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 K7EQG2 157 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms