RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 RGS12O14924 1447 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 RTTNQ86VV8 2226 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 TECPR2O15040 1411 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 TRAV12-1A0A0B4J245 112 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 TRDV1A0A1B0GX56 115 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 LYZL6O75951 148 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 OR10J4P0C629 311 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 RPL35P42766 123 aaKnown RBP1.61□□□□□ -2.15
SNRPF-202ENST00000549580 HBBP68871 147 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 PDE6HQ13956 83 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 SURF2Q15527 256 aaPredicted RBP1.61□□□□□ -2.15
SNRPF-202ENST00000549580 PHF5AQ7RTV0 110 aaKnown RBP1.61□□□□□ -2.15
SNRPF-202ENST00000549580 OR5D16Q8NGK9 328 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 THEM6Q8WUY1 208 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 LRTM1Q9HBL6 345 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 OTORQ9NRC9 128 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 GINS2Q9Y248 185 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 RNF11Q9Y3C5 154 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 ASB4Q9Y574 426 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 SCN8AQ9UQD0 1980 aa1.61□□□□□ -2.15
SNRPF-202ENST00000549580 NUP210LQ5VU65 1888 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 ANAPC1Q9H1A4 1944 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 C17orf112F2Z3M2 114 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 RER1O15258 196 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 DHFRP00374 187 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 S100A11P31949 105 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 RAB4BP61018 213 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 EIF3IQ13347 325 aaKnown RBP1.6□□□□□ -2.15
SNRPF-202ENST00000549580 C10orf55Q5SWW7 151 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 PATE2Q6UY27 113 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 TMEM35BQ8NCS4 154 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 TMEM254Q8TBM7 123 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 RETNLBQ9BQ08 111 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 NAA38Q9BRA0 125 aaKnown RBP1.6□□□□□ -2.15
SNRPF-202ENST00000549580 TCEAL2Q9H3H9 227 aaPredicted RBP1.6□□□□□ -2.15
SNRPF-202ENST00000549580 BATF3Q9NR55 127 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 SPANXA1Q9NS26 97 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 NAT8BQ9UHF3 227 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 ADGBQ8N7X0 1667 aa1.6□□□□□ -2.15
SNRPF-202ENST00000549580 EML6Q6ZMW3 1958 aa1.59□□□□□ -2.15
SNRPF-202ENST00000549580 COL11A1P12107 1806 aaPredicted RBP1.59□□□□□ -2.15
SNRPF-202ENST00000549580 NUP98P52948 1817 aa1.59□□□□□ -2.15
SNRPF-202ENST00000549580 BRWD1Q9NSI6 2320 aa1.59□□□□□ -2.15
SNRPF-202ENST00000549580 K7ERJ3 54 aa1.59□□□□□ -2.15
SNRPF-202ENST00000549580 POLR2HP52434 150 aaKnown RBP1.59□□□□□ -2.15
SNRPF-202ENST00000549580 NDUFA6P56556 154 aa1.59□□□□□ -2.15
SNRPF-202ENST00000549580 KLRD1Q13241 179 aa1.59□□□□□ -2.15
SNRPF-202ENST00000549580 DEFB113Q30KQ7 82 aa1.59□□□□□ -2.15
SNRPF-202ENST00000549580 CHCHD1Q96BP2 118 aaKnown RBP1.59□□□□□ -2.15
SNRPF-202ENST00000549580 AIF1LQ9BQI0 150 aa1.59□□□□□ -2.15
SNRPF-202ENST00000549580 PCDH15Q96QU1 1955 aa1.59□□□□□ -2.16
SNRPF-202ENST00000549580 ARL5CA6NH57 179 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 GABARAPH6UMI1 98 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 H7BYZ3 331 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 KPNA4O00629 521 aaPredicted RBP1.58□□□□□ -2.16
SNRPF-202ENST00000549580 MRPS14O60783 128 aaKnown RBP1.58□□□□□ -2.16
SNRPF-202ENST00000549580 FABP2P12104 132 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 RPL7P18124 248 aaKnown RBP1.58□□□□□ -2.16
SNRPF-202ENST00000549580 RAB5CP51148 216 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 ROMO1P60602 79 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 CLECL1Q8IZS7 167 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 ST6GALNAC3Q8NDV1 305 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 ZNF563Q8TA94 476 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 C4orf3Q8WVX3 66 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 CCDC115Q96NT0 180 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 MED9Q9NWA0 146 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 RASL12Q9NYN1 266 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 MED31Q9Y3C7 131 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 MYH10P35580 1976 aa1.58□□□□□ -2.16
SNRPF-202ENST00000549580 MICAL3Q7RTP6 2002 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 TCRBV4S1A1TA0A5B7 111 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 M0R233 179 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 HYPMO75409 117 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 SDC2P34741 201 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 CDK5R1Q15078 307 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 ALX1Q15699 326 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 HRCT1Q6UXD1 115 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 C4orf22Q6V702 233 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 OR5D14Q8NGL3 314 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 OR4C6Q8NH72 309 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 POP5Q969H6 163 aaKnown RBP1.57□□□□□ -2.16
SNRPF-202ENST00000549580 LXNQ9BS40 222 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 REG4Q9BYZ8 158 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 SOX21Q9Y651 276 aaPredicted RBP1.57□□□□□ -2.16
SNRPF-202ENST00000549580 BCL9O00512 1426 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 TRAPPC8Q9Y2L5 1435 aa1.57□□□□□ -2.16
SNRPF-202ENST00000549580 IGHV1-58A0A0C4DH39 117 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 OR2T8A6NH00 312 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 LYRM1O43325 122 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 SCGB1A1P11684 91 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 RNASE3P12724 160 aaKnown RBP1.56□□□□□ -2.16
SNRPF-202ENST00000549580 DSCR4P56555 118 aaPredicted RBP1.56□□□□□ -2.16
SNRPF-202ENST00000549580 CDK6Q00534 326 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 C1orf137Q5JT78 98 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 C2orf82Q6UX34 121 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 Q8N2B8 174 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 MCEEQ96PE7 176 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 TP53RKQ96S44 253 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 SPANXCQ9NY87 97 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 TRAPPC2LQ9UL33 140 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 691.6 ms