RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 JPT1Q9UK76 154 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 LY96Q9Y6Y9 160 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 IGHV3-49A0A0A0MS15 119 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 SAA2P0DJI9 122 aaPredicted RBP8.99□□□□□ -0.97
PBX1-212ENST00000540236 HTN1P15515 57 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 CCL13Q99616 98 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 C21orf140B9A014 251 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 PSPNO60542 156 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 GFRA3O60609 400 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 C10orf128Q5T292 105 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 DUSP23Q9BVJ7 150 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 PPDPFQ9H3Y8 114 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 TCRBV4S1A1TA0A5B7 111 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 RRN3P1Q2M238 152 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 HES7Q9BYE0 225 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 DYSFO75923 2080 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 TRBV25-1A0A075B6N4 114 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 LOC107984640A0A0U1RRK4 108 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 CDX4O14627 284 aaPredicted RBP8.98□□□□□ -0.97
PBX1-212ENST00000540236 KLRD1Q13241 179 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 DUX3Q96PT4 197 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 CXorf51AA0A1B0GTR3 108 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 M0R381 172 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 NPYP01303 97 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 LINC01545Q5VT33 79 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 MYO7AQ13402 2215 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 C15orf61A6NNL5 157 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 RFPL3SP0C7P2 107 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 LINC00694P0DN24 101 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 GATA1P15976 413 aaPredicted RBP8.98□□□□□ -0.97
PBX1-212ENST00000540236 PMVKQ15126 192 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 VMA21Q3ZAQ7 101 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 UFSP1Q6NVU6 142 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 GTSF1Q8WW33 167 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 NGBQ9NPG2 151 aa8.98□□□□□ -0.97
PBX1-212ENST00000540236 EFNA4P52798 201 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 ZFP2Q6ZN57 461 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 MRAPQ8TCY5 172 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 SLC25A16P16260 332 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 CRYGSP22914 178 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 MPV17P39210 176 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 MRPL35Q9NZE8 188 aaKnown RBP8.97□□□□□ -0.97
PBX1-212ENST00000540236 KNTC1P50748 2209 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 IGKV3D-15A0A087WSY6 115 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 TRAV41A0A0B4J266 112 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 IGKV3-15P01624 115 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 RSPO1Q2MKA7 263 aaPredicted RBP8.97□□□□□ -0.97
PBX1-212ENST00000540236 SLC25A53Q5H9E4 307 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 FAM120AOSQ5T036 256 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 PRRG2O14669 202 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 SLC25A20O43772 301 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 IGF2BP2-AS1Q96M15 143 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 FOXF2Q12947 444 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 C5orf64Q2M2E5 130 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 FAM214BQ7L5A3 538 aa8.97□□□□□ -0.97
PBX1-212ENST00000540236 SPRY2O43597 315 aa8.96□□□□□ -0.97
PBX1-212ENST00000540236 DUTP33316 252 aaKnown RBP8.96□□□□□ -0.97
PBX1-212ENST00000540236 MAFAQ8NHW3 353 aaPredicted RBP8.96□□□□□ -0.97
PBX1-212ENST00000540236 KIAA1549LQ6ZVL6 1849 aa8.96□□□□□ -0.97
PBX1-212ENST00000540236 SAA1P0DJI8 122 aaPredicted RBP8.96□□□□□ -0.97
PBX1-212ENST00000540236 MRPL51Q4U2R6 128 aaKnown RBP8.96□□□□□ -0.97
PBX1-212ENST00000540236 SPATA25Q9BR10 227 aa8.96□□□□□ -0.97
PBX1-212ENST00000540236 H3BMM0 161 aa8.96□□□□□ -0.98
PBX1-212ENST00000540236 ERCC8Q13216 396 aa8.96□□□□□ -0.98
PBX1-212ENST00000540236 UBE2WQ96B02 151 aa8.96□□□□□ -0.98
PBX1-212ENST00000540236 A0A0C4DFX4 3053 aa8.96□□□□□ -0.98
PBX1-212ENST00000540236 MYMXA0A1B0GTQ4 84 aa8.95□□□□□ -0.98
PBX1-212ENST00000540236 USP34Q70CQ2 3546 aa8.95□□□□□ -0.98
PBX1-212ENST00000540236 GUSBP11Q6P575 273 aa8.95□□□□□ -0.98
PBX1-212ENST00000540236 MGST3O14880 152 aa8.95□□□□□ -0.98
PBX1-212ENST00000540236 SH2D1AO60880 128 aa8.95□□□□□ -0.98
PBX1-212ENST00000540236 ATP5LO75964 103 aa8.95□□□□□ -0.98
PBX1-212ENST00000540236 IGHV1OR21-1A0A087WYE8 117 aa8.95□□□□□ -0.98
PBX1-212ENST00000540236 RALGAPA1Q6GYQ0 2036 aa8.95□□□□□ -0.98
PBX1-212ENST00000540236 HIST1H4AP62805 103 aaKnown RBP8.95□□□□□ -0.98
PBX1-212ENST00000540236 FAM236AA0A1B0GUQ0 79 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 FAM236BA0A1B0GV22 79 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 LGALS9BQ3B8N2 356 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 C5orf47Q569G3 176 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 FAM74A4Q5TZK3 123 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 LGALS9CQ6DKI2 356 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 IGLV2-14P01704 120 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 PRDM14Q9GZV8 571 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 PKIGQ9Y2B9 76 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 ANAPC1Q9H1A4 1944 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 A0A1W2PR77 199 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 COX6CP09669 75 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 OR10J6PQ8NGY7 276 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 FOXA2Q9Y261 457 aaPredicted RBP8.94□□□□□ -0.98
PBX1-212ENST00000540236 RTTNQ86VV8 2226 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 FOXC1Q12948 553 aa8.94□□□□□ -0.98
PBX1-212ENST00000540236 IGKV2D-26A0A0A0MRZ7 120 aa8.93□□□□□ -0.98
PBX1-212ENST00000540236 CRIP3Q6Q6R5 217 aa8.93□□□□□ -0.98
PBX1-212ENST00000540236 LAGE3Q14657 143 aa8.93□□□□□ -0.98
PBX1-212ENST00000540236 ATXN8Q156A1 80 aa8.93□□□□□ -0.98
PBX1-212ENST00000540236 GAGE2AQ6NT46 116 aa8.93□□□□□ -0.98
PBX1-212ENST00000540236 Q6P435 159 aa8.93□□□□□ -0.98
PBX1-212ENST00000540236 OR11H6Q8NGC7 330 aa8.93□□□□□ -0.98
PBX1-212ENST00000540236 REPIN1Q9BWE0 567 aaKnown RBP8.93□□□□□ -0.98
PBX1-212ENST00000540236 MRPL20Q9BYC9 149 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms