RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 AAMDCQ9H7C9 122 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 ZFP30Q9Y2G7 519 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 ABCA4P78363 2273 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 LRBAP50851 2863 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 CACNA1AO00555 2505 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 IGHV7-81A0A0B4J1V7 117 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 A0A1W2PRD5 423 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 A0A1W2PRF3 423 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 A0A1W2PRM7 423 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 HSBP1L1C9JCN9 74 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 IGHV4-39P01824 125 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 IGLC2P0DOY2 106 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 PAX1P15863 534 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 CSN1S1P47710 185 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 DSCR9P59020 149 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 GNG5P63218 68 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 NDPQ00604 133 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 GAGE1Q13065 139 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 ASPHD1Q5U4P2 390 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 Q6AWC8 147 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 CYB5R2Q6BCY4 276 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 PRR27Q6MZM9 219 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 BAGE3Q86Y29 109 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 NUDT10Q8NFP7 164 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 FAM168AQ92567 244 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 NUDT11Q96G61 164 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 NOL4LQ96MY1 436 aaPredicted RBP5.22□□□□□ -1.57
USP28-206ENST00000538224 FAM103A1Q9BTL3 118 aaKnown RBP5.22□□□□□ -1.57
USP28-206ENST00000538224 GSX1Q9H4S2 264 aaPredicted RBP5.22□□□□□ -1.57
USP28-206ENST00000538224 ZNF586Q9NXT0 402 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 RABAC1Q9UI14 185 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 FBXL7Q9UJT9 491 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 RPH3ALQ9UNE2 315 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 MOB4Q9Y3A3 225 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 ATRXP46100 2492 aa5.22□□□□□ -1.57
USP28-206ENST00000538224 TRAV34A0A0B4J273 112 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 A0A1B0GW15 77 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 C19orf71A6NCJ1 209 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 NPIPB6E9PJ23 425 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 C19orf84I3L1E1 186 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 NDUFS7O75251 213 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 OR2J3O76001 311 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 APCSP02743 223 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 GZMBP10144 247 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 CD24P25063 80 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 CRIP2P52943 208 aaPredicted RBP5.21□□□□□ -1.58
USP28-206ENST00000538224 TCL1AP56279 114 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 NUTF2P61970 127 aaKnown RBP5.21□□□□□ -1.58
USP28-206ENST00000538224 HBBP68871 147 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 PAX8Q06710 450 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 DMRTA1Q5VZB9 504 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 RUSC1-AS1Q66K80 236 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 LEMD1Q68G75 181 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 CFAP161Q6P656 301 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 UNQ5815/PRO19632Q6UWF5 114 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 SIGLEC15Q6ZMC9 328 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 DYNAPQ8N1N2 210 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 CIARTQ8N365 385 aaPredicted RBP5.21□□□□□ -1.58
USP28-206ENST00000538224 NHLRC2Q8NBF2 726 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 C10orf105Q8TEF2 133 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 EEF1AKMT3Q96AZ1 226 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 KCNS1Q96KK3 526 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 LINC00479Q96M42 142 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 MS4A10Q96PG2 267 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 SAMD10Q9BYL1 202 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 PRSS22Q9GZN4 317 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 CHD8Q9HCK8 2581 aa5.21□□□□□ -1.58
USP28-206ENST00000538224 COL6A6A6NMZ7 2263 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 TRBV7-1A0A0A6YYK4 115 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 IGHV1-69DA0A0B4J2H0 117 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 CENPVL3A0A0U1RRI6 287 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 HIGD1CA8MV81 97 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 M0QZK8 103 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 MRPS12O15235 138 aaKnown RBP5.2□□□□□ -1.58
USP28-206ENST00000538224 SERF1AO75920 110 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 IGHV1-69P01742 117 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 CT45A10P0DMU9 189 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 GATA3P23771 443 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 COL8A1P27658 744 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 PSG3Q16557 428 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 MRPL54Q6P161 138 aaKnown RBP5.2□□□□□ -1.58
USP28-206ENST00000538224 RBPMS2Q6ZRY4 209 aaKnown RBP5.2□□□□□ -1.58
USP28-206ENST00000538224 GOLT1AQ6ZVE7 132 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 SIGLECL1Q8N7X8 197 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 NUP35Q8NFH5 326 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 ZNF502Q8TBZ5 544 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 BORCS7Q96B45 105 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 ZNF414Q96IQ9 312 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 TMUB1Q9BVT8 246 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 PRDM13Q9H4Q3 707 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 ARHGAP32A7KAX9 2087 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 NCOR2Q9Y618 2525 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 DCHS2Q6V1P9 2916 aa5.2□□□□□ -1.58
USP28-206ENST00000538224 A0A087X0K7 114 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 A0A1B0GXF2 115 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 GRIFINA4D1Z8 144 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 OR2T8A6NH00 312 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 FAM223BA6NKX1 122 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 VWC2LB2RUY7 222 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 DIRC3C9JPN6 131 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms