RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 PKDREJQ9NTG1 2253 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 IGLV11-55A0A075B6I3 123 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 NPFFO15130 113 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 GATA3P23771 443 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 HERV-K104P63124 156 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 NDPQ00604 133 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 PRB3Q04118 309 aaPredicted RBP6.3□□□□□ -1.4
COL21A1-212ENST00000535941 PRSS57Q6UWY2 283 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 ZNF562Q6V9R5 426 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 MOB3BQ86TA1 216 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 OR10G9Q8NGN4 311 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 OR10G7Q8NGN6 311 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 FAM167A-AS1Q96KT0 104 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 COMMD5Q9GZQ3 224 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 CDC42EP3Q9UKI2 254 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 A0A1W2PRD5 423 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 A0A1W2PRF3 423 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 A0A1W2PRM7 423 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 K7EIM0 57 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 CORTO00230 105 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 AMY1AP04745 511 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 CBLN1P23435 193 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 RPL27AP46776 148 aaKnown RBP6.3□□□□□ -1.4
COL21A1-212ENST00000535941 RPL15P61313 204 aaKnown RBP6.3□□□□□ -1.4
COL21A1-212ENST00000535941 KLF17Q5JT82 389 aaPredicted RBP6.3□□□□□ -1.4
COL21A1-212ENST00000535941 AMMECR1LQ6DCA0 310 aa6.3□□□□□ -1.4
COL21A1-212ENST00000535941 SRSF12Q8WXF0 261 aaKnown RBP6.3□□□□□ -1.4
COL21A1-212ENST00000535941 MRPS16Q9Y3D3 137 aaKnown RBP6.3□□□□□ -1.4
COL21A1-212ENST00000535941 TRBV9A0A0B4J1U6 114 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 IGHV7-81A0A0B4J1V7 117 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 IGHV1-69DA0A0B4J2H0 117 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 TCRBV4S1A1TA0A5B7 111 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 ZNF253O75346 499 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 IGHV1-69P01742 117 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 C11orf52Q96A22 123 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 SFRP2Q96HF1 295 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 FANCD2OSQ96PS1 177 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 CUBNO60494 3623 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 IGHV3-72A0A0B4J1Y9 119 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 TMEM250H0YL14 139 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 SAA4P35542 130 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 MYCNOSP40205 109 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 ERHP84090 104 aaKnown RBP6.29□□□□□ -1.4
COL21A1-212ENST00000535941 GCSAMLQ5JQS6 135 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 PATE2Q6UY27 113 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 BORCS7Q96B45 105 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 FBXL15Q9H469 300 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 NTF3P20783 257 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 ZNF90Q03938 601 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 C5orf56Q8N8D9 126 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 TXNDC17Q9BRA2 123 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 SLC25A2Q9BXI2 301 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 MRPL32Q9BYC8 188 aaKnown RBP6.29□□□□□ -1.4
COL21A1-212ENST00000535941 NRN1Q9NPD7 142 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 HIF1ANQ9NWT6 349 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 SS18L2Q9UHA2 77 aa6.29□□□□□ -1.4
COL21A1-212ENST00000535941 NAV3Q8IVL0 2385 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 MDFIC2A0A1B0GVS7 189 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 OR2T8A6NH00 312 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 MT-CO2P00403 227 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 MSMBP08118 114 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 CTRLP40313 264 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 KRTAP10-9P60411 292 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 RPS20P60866 119 aaKnown RBP6.28□□□□□ -1.4
COL21A1-212ENST00000535941 MLANAQ16655 118 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 FAM120AOSQ5T036 256 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 MIC13Q5XKP0 118 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 ZNF479Q96JC4 524 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 MRPL18Q9H0U6 180 aaKnown RBP6.28□□□□□ -1.4
COL21A1-212ENST00000535941 ENY2Q9NPA8 101 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 J3QLI3 93 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 COX6B1P14854 86 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 NPPCP23582 126 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 OR8I2Q8N0Y5 310 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 ATP6V0BQ99437 205 aa6.28□□□□□ -1.4
COL21A1-212ENST00000535941 CFHR3Q02985 330 aa6.27□□□□□ -1.4
COL21A1-212ENST00000535941 OR2T6Q8NHC8 308 aa6.27□□□□□ -1.4
COL21A1-212ENST00000535941 SLC25A22Q9H936 323 aa6.27□□□□□ -1.4
COL21A1-212ENST00000535941 A6NDX4 124 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 IGLC1P0CG04 106 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 SUB1P53999 127 aaKnown RBP eCLIP6.27□□□□□ -1.41
COL21A1-212ENST00000535941 RHOGP84095 191 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 TECRQ9NZ01 308 aaKnown RBP6.27□□□□□ -1.41
COL21A1-212ENST00000535941 WI2-2373I1.2A0A1W2PRP0 233 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 F2Z2F3 143 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 MRPS12O15235 138 aaKnown RBP6.27□□□□□ -1.41
COL21A1-212ENST00000535941 CXorf1O96002 111 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 AVPP01185 164 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 GPX1P07203 203 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 ATP5J2P56134 94 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 CKS1BP61024 79 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 TNXAQ16473 311 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 SPATA31B1PQ5VZV4 182 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 TMEM190Q8WZ59 177 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 AP1S3Q96PC3 154 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 SLC25A33Q9BSK2 321 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 APCP25054 2843 aa6.27□□□□□ -1.41
COL21A1-212ENST00000535941 PAGE4O60829 102 aa6.26□□□□□ -1.41
COL21A1-212ENST00000535941 IER3P46695 156 aa6.26□□□□□ -1.41
COL21A1-212ENST00000535941 DEFB113Q30KQ7 82 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms