RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 TRBV7-6A0A0J9YX20 115 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 GABARAPH6UMI1 98 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 H7BYZ3 331 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 TPST1O60507 370 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 DPM2O94777 84 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 TNFSF15O95150 251 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 IFNA4P05014 189 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 MPC1LP0DKB6 136 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 EVI2AP22794 236 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 RPL35P42766 123 aaKnown RBP1.97□□□□□ -2.09
USP47-211ENST00000531513 DYNLT1P63172 113 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 RHOGP84095 191 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 ELOBQ15370 118 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 MSMO1Q15800 293 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 HRCT1Q6UXD1 115 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 SOSTDC1Q6X4U4 206 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 PDZD9Q8IXQ8 264 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 ZCCHC13Q8WW36 166 aaKnown RBP1.97□□□□□ -2.09
USP47-211ENST00000531513 MAGOHBQ96A72 148 aaKnown RBP1.97□□□□□ -2.09
USP47-211ENST00000531513 CARD19Q96LW7 228 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 CGREF1Q99674 301 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 LINC00467Q9BRT7 94 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 BCL2L10Q9HD36 194 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 OTORQ9NRC9 128 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 HS3ST2Q9Y278 367 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 MYO9BQ13459 2157 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 TRAPPC8Q9Y2L5 1435 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 WDR7Q9Y4E6 1490 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 TRAV1-1A0A0B4J248 108 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 C9JAW5 83 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 HIST1H2BKO60814 126 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 OR2H2O95918 312 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 HIST1H2BJP06899 126 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 UBBP0CG47 229 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 HBBP68871 147 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 VMA21Q3ZAQ7 101 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 LINC00471Q8N535 108 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 C3orf56Q8N813 242 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 OR5D16Q8NGK9 328 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 MCEEQ96PE7 176 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 SLC50A1Q9BRV3 221 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 NPCDR1Q9BY65 106 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 CACYBPQ9HB71 228 aaKnown RBP1.96□□□□□ -2.1
USP47-211ENST00000531513 HIGD1AQ9Y241 93 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 OVOS2A0A0G2JMS6 1433 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 PLXNA3P51805 1871 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 HEATR5AQ86XA9 2040 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 PTPRBP23467 1997 aa1.96□□□□□ -2.1
USP47-211ENST00000531513 A2MP01023 1474 aa1.95□□□□□ -2.1
USP47-211ENST00000531513 A8MWV9 139 aa1.95□□□□□ -2.1
USP47-211ENST00000531513 K7EP13 123 aa1.95□□□□□ -2.1
USP47-211ENST00000531513 FABP2P12104 132 aa1.95□□□□□ -2.1
USP47-211ENST00000531513 TMBIM6P55061 237 aa1.95□□□□□ -2.1
USP47-211ENST00000531513 ZNF846Q147U1 533 aa1.95□□□□□ -2.1
USP47-211ENST00000531513 ESRGQ1W209 222 aa1.95□□□□□ -2.1
USP47-211ENST00000531513 RPL13AP3Q6NVV1 102 aa1.95□□□□□ -2.1
USP47-211ENST00000531513 LINC00305Q7Z4B0 112 aa1.95□□□□□ -2.1
USP47-211ENST00000531513 ZNF714Q96N38 554 aa1.95□□□□□ -2.1
USP47-211ENST00000531513 NCKAP5O14513 1909 aa1.95□□□□□ -2.1
USP47-211ENST00000531513 CEP164Q9UPV0 1460 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 OBSL1O75147 1896 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 MYH7BA7E2Y1 1941 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 A0A096LPI6 279 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 C5orf58C9J3I9 102 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 J3QR89 54 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 TIMM17BO60830 172 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 CXCL1P09341 107 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 BAALC-AS2P0C853 105 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 MGST1P10620 155 aaKnown RBP1.94□□□□□ -2.1
USP47-211ENST00000531513 MIFP14174 115 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 ARPP19P56211 112 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 Q1T7F1 81 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 OR4S1Q8NGB4 309 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 VPS25Q9BRG1 176 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 RNF11Q9Y3C5 154 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 SBF1O95248 1867 aa1.94□□□□□ -2.1
USP47-211ENST00000531513 CCDC88CQ9P219 2028 aa1.93□□□□□ -2.1
USP47-211ENST00000531513 KIAA2026Q5HYC2 2103 aa1.93□□□□□ -2.1
USP47-211ENST00000531513 ZFHX2Q9C0A1 2572 aaPredicted RBP1.93□□□□□ -2.1
USP47-211ENST00000531513 TRAV13-1A0A0B4J241 112 aa1.93□□□□□ -2.1
USP47-211ENST00000531513 TRAV3A0A0B4J244 114 aa1.93□□□□□ -2.1
USP47-211ENST00000531513 LOC107984640A0A0U1RRK4 108 aa1.93□□□□□ -2.1
USP47-211ENST00000531513 ODAMA1E959 279 aa1.93□□□□□ -2.1
USP47-211ENST00000531513 H3BMG7 143 aa1.93□□□□□ -2.1
USP47-211ENST00000531513 M0R2Z0 102 aa1.93□□□□□ -2.1
USP47-211ENST00000531513 RPL22P35268 128 aaKnown RBP1.93□□□□□ -2.1
USP47-211ENST00000531513 LSM3P62310 102 aaKnown RBP1.93□□□□□ -2.1
USP47-211ENST00000531513 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
USP47-211ENST00000531513 C4orf22Q6V702 233 aa1.93□□□□□ -2.1
USP47-211ENST00000531513 OR51A4Q8NGJ6 313 aa1.93□□□□□ -2.1
USP47-211ENST00000531513 AP1S3Q96PC3 154 aa1.93□□□□□ -2.1
USP47-211ENST00000531513 U3KQ87 197 aa1.93□□□□□ -2.1
USP47-211ENST00000531513 NUP210LQ5VU65 1888 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 TRBV27A0A0K0K1C4 114 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 RER1O15258 196 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 PAEPP09466 180 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 ASAH2BP0C7U1 165 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 ZNF705BP0CI00 300 aaPredicted RBP1.92□□□□□ -2.1
USP47-211ENST00000531513 SSR2P43308 183 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 DEFB103AP81534 67 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms