RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 Q6ZQT0 140 aa1.11□□□□□ -2.23
COPB1-203ENST00000525214 PHF5AQ7RTV0 110 aaKnown RBP1.11□□□□□ -2.23
COPB1-203ENST00000525214 ST6GALNAC3Q8NDV1 305 aa1.11□□□□□ -2.23
COPB1-203ENST00000525214 MAFIPQ8WZ33 124 aa1.11□□□□□ -2.23
COPB1-203ENST00000525214 LZICQ8WZA0 190 aa1.11□□□□□ -2.23
COPB1-203ENST00000525214 ZNF714Q96N38 554 aa1.11□□□□□ -2.23
COPB1-203ENST00000525214 MCEEQ96PE7 176 aa1.11□□□□□ -2.23
COPB1-203ENST00000525214 TXNDC17Q9BRA2 123 aa1.11□□□□□ -2.23
COPB1-203ENST00000525214 TIMM21Q9BVV7 248 aa1.11□□□□□ -2.23
COPB1-203ENST00000525214 TTTY12Q9BZ98 90 aa1.11□□□□□ -2.23
COPB1-203ENST00000525214 MED31Q9Y3C7 131 aa1.11□□□□□ -2.23
COPB1-203ENST00000525214 LHFPL6Q9Y693 200 aa1.11□□□□□ -2.23
COPB1-203ENST00000525214 ARHGEF28Q8N1W1 1705 aaKnown RBP1.11□□□□□ -2.23
COPB1-203ENST00000525214 CPAMD8Q8IZJ3 1885 aa1.11□□□□□ -2.23
COPB1-203ENST00000525214 ARAP1Q96P48 1450 aa1.11□□□□□ -2.23
COPB1-203ENST00000525214 PCDH15Q96QU1 1955 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 PIK3C2AO00443 1686 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 DISP1Q96F81 1524 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 TRAPPC8Q9Y2L5 1435 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 SDK1Q7Z5N4 2213 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 TRAV36DV7A0A075B6V5 113 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 A0A0G2JQZ4 141 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 IBA57-AS1B1ANH7 110 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 GABARAPH6UMI1 98 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 C1QCP02747 245 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 SHBGP04278 402 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 HMGN1P05114 100 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 ZNF705BP0CI00 300 aaPredicted RBP1.1□□□□□ -2.23
COPB1-203ENST00000525214 RPL7P18124 248 aaKnown RBP1.1□□□□□ -2.23
COPB1-203ENST00000525214 FKBP2P26885 142 aaKnown RBP1.1□□□□□ -2.23
COPB1-203ENST00000525214 SDC2P34741 201 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 SRP9P49458 86 aaKnown RBP1.1□□□□□ -2.23
COPB1-203ENST00000525214 TMBIM6P55061 237 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 TMEM155Q4W5P6 130 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 SOSTDC1Q6X4U4 206 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 C7orf65Q6ZTY9 151 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 RPS19BP1Q86WX3 136 aaKnown RBP1.1□□□□□ -2.23
COPB1-203ENST00000525214 LXNQ9BS40 222 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 CACYBPQ9HB71 228 aaKnown RBP1.1□□□□□ -2.23
COPB1-203ENST00000525214 OTORQ9NRC9 128 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 NAT8BQ9UHF3 227 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 JPT1Q9UK76 154 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 LY96Q9Y6Y9 160 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 NCKAP5O14513 1909 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 POLEQ07864 2286 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 ADAMTS7Q9UKP4 1686 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 CCDC88CQ9P219 2028 aa1.1□□□□□ -2.23
COPB1-203ENST00000525214 ARHGEF10O15013 1369 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 COL4A2P08572 1712 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 HEATR1Q9H583 2144 aaKnown RBP1.09□□□□□ -2.23
COPB1-203ENST00000525214 BRWD1Q9NSI6 2320 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 TANC2Q9HCD6 1990 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 TRPM1Q7Z4N2 1603 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 IGKV1D-42A0A075B6H8 117 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 IGHV1-58A0A0C4DH39 117 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 TRBV7-6A0A0J9YX20 115 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 ODAMA1E959 279 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 C17orf112F2Z3M2 114 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 H7BYZ3 331 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 M0QZK8 103 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 ARPC5O15511 151 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 LYZL6O75951 148 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 UBL3O95164 117 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 CXCL1P09341 107 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 ASAH2BP0C7U1 165 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 UBBP0CG47 229 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 MGST1P10620 155 aaKnown RBP1.09□□□□□ -2.23
COPB1-203ENST00000525214 GPX2P18283 190 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 AKR1C3P42330 323 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 ARPP19P56211 112 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 MSMO1Q15800 293 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 OR8I2Q8N0Y5 310 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 C3orf56Q8N813 242 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 TMEM229BQ8NBD8 167 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 LINC00301Q8NCQ3 95 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 OR4K15Q8NH41 348 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 BORCS5Q969J3 196 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 CARD19Q96LW7 228 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 SLC50A1Q9BRV3 221 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 RASL12Q9NYN1 266 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 GSKIPQ9P0R6 139 aa1.09□□□□□ -2.23
COPB1-203ENST00000525214 CEP164Q9UPV0 1460 aa1.09□□□□□ -2.24
COPB1-203ENST00000525214 NUP210LQ5VU65 1888 aa1.09□□□□□ -2.24
COPB1-203ENST00000525214 MDC1Q14676 2089 aaKnown RBP1.09□□□□□ -2.24
COPB1-203ENST00000525214 NINQ8N4C6 2090 aa1.09□□□□□ -2.24
COPB1-203ENST00000525214 NISCHQ9Y2I1 1504 aa1.09□□□□□ -2.24
COPB1-203ENST00000525214 RTL9Q8NET4 1388 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 CR1P17927 2039 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 SCN3AQ9NY46 2000 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 NUP98P52948 1817 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 NUP210Q8TEM1 1887 aaPredicted RBP1.08□□□□□ -2.24
COPB1-203ENST00000525214 PXDNLA1KZ92 1463 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 A0A087WX48 190 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 TMEM189A5PLL7 270 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 RER1O15258 196 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 ZNF737O75373 536 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 SCTP09683 121 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 FABP2P12104 132 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 RPS3P23396 243 aaKnown RBP eCLIP1.08□□□□□ -2.247e-8■■■■□ 24
COPB1-203ENST00000525214 RAB5CP51148 216 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms