RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 LRRK1Q38SD2 2015 aa6.89□□□□□ -1.31
SHPRH-208ENST00000520752 TRBV7-3A0A075B6L6 115 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 IGKV1-27A0A075B6S5 117 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 TRAV24A0A0B4J272 114 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 A0A1W2PQF6 199 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 SRRM4A7MD48 611 aaKnown RBP6.88□□□□□ -1.31
SHPRH-208ENST00000520752 PRSS46E5RG02 174 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 M0R135 149 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 ZG16O60844 167 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 RPL13AP40429 203 aaKnown RBP6.88□□□□□ -1.31
SHPRH-208ENST00000520752 ZNF474Q6S9Z5 364 aaPredicted RBP6.88□□□□□ -1.31
SHPRH-208ENST00000520752 MKXQ8IYA7 352 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 OR8A1Q8NGG7 326 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 OR1L8Q8NGR8 309 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 FLVCR1-AS1Q8TAF5 88 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 ZNF799Q96GE5 643 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 ZNF488Q96MN9 340 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 KIR2DL4Q99706 377 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 MLST8Q9BVC4 326 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 DEPPQ9NTK1 212 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 C21orf62Q9NYP8 219 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 F11RQ9Y624 299 aaKnown RBP6.88□□□□□ -1.31
SHPRH-208ENST00000520752 U3KQK5 164 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 KIAA1549Q9HCM3 1950 aa6.88□□□□□ -1.31
SHPRH-208ENST00000520752 TRAV4A0A0B4J268 109 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 TRGV8A0A0C4DH27 118 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 LINC01546A6NGU7 62 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 PEX7O00628 323 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 IGLV2-14P01704 120 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 CLPSP04118 112 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 B4GALT1P15291 398 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 C1orf61Q13536 156 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 OR1C1Q15619 314 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 TWIST1Q15672 202 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 C9orf153Q5TBE3 101 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 TEX36Q5VZQ5 186 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 OR4C13Q8NGP0 309 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 ZNF524Q96C55 264 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 OBP2BQ9NPH6 170 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 AMMECR1Q9Y4X0 333 aaPredicted RBP6.87□□□□□ -1.31
SHPRH-208ENST00000520752 WNT6Q9Y6F9 365 aa6.87□□□□□ -1.31
SHPRH-208ENST00000520752 TRAV8-2A0A0B4J237 113 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 TRAV8-4A0A0B4J246 113 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 TRBV6-1A0A0K0K1D8 114 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 C19orf71A6NCJ1 209 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 ACTL6BO94805 426 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 P01737 135 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 CECR9P0C854 216 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 CTGFP29279 349 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 ZNF77Q15935 545 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 ANXA2RQ3ZCQ2 193 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 IGFL4Q6B9Z1 124 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 C10orf126Q8N4M7 172 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 DRAM1Q8N682 238 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 TSACCQ96A04 125 aaPredicted RBP6.86□□□□□ -1.31
SHPRH-208ENST00000520752 HIST1H4GQ99525 98 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 FZR1Q9UM11 496 aa6.86□□□□□ -1.31
SHPRH-208ENST00000520752 COL4A5P29400 1685 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 DPM2O94777 84 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 IGKCP01834 107 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 LGALS1P09382 135 aaKnown RBP6.85□□□□□ -1.31
SHPRH-208ENST00000520752 DEFA4P12838 97 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 CRYGSP22914 178 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 PSMB2P49721 201 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 UBE2D1P51668 147 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 HSPE1P61604 102 aaKnown RBP6.85□□□□□ -1.31
SHPRH-208ENST00000520752 HERVK_113P63121 156 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 EIF4EBP1Q13541 118 aaPredicted RBP6.85□□□□□ -1.31
SHPRH-208ENST00000520752 DAZAP2Q15038 168 aaPredicted RBP6.85□□□□□ -1.31
SHPRH-208ENST00000520752 KRTAP27-1Q3LI81 207 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 C17orf99Q6UX52 265 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 ZNF493Q6ZR52 646 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 MIR17HGQ75NE6 70 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 SLC22A18ASQ8N1D0 253 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 ANKRD29Q8N6D5 301 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 C15orf53Q8NAA6 179 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 TMEM116Q8NCL8 245 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 SLC37A2Q8TED4 501 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 NPIPB3Q92617 1050 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 TIMD4Q96H15 378 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 SRSF8Q9BRL6 282 aaKnown RBP6.85□□□□□ -1.31
SHPRH-208ENST00000520752 MCRIP2Q9BUT9 160 aaKnown RBP6.85□□□□□ -1.31
SHPRH-208ENST00000520752 PRO0628Q9UI54 55 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 HHLA3Q9XRX5 114 aa6.85□□□□□ -1.31
SHPRH-208ENST00000520752 CACNA1IQ9P0X4 2223 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 A0A096LNJ9 63 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 TRAV2A0A0B4J234 112 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 A0A1B0GUT8 65 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 A0A1W2PPC4 97 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 C16orf97H3BN30 126 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 CRYGAP11844 174 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 TMEM258P61165 79 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 PLGLB1Q02325 96 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 NNATQ16517 81 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 RSPO1Q2MKA7 263 aaPredicted RBP6.84□□□□□ -1.31
SHPRH-208ENST00000520752 FMC1Q96HJ9 113 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 TRGV9Q99603 122 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 ASCL2Q99929 193 aa6.84□□□□□ -1.31
SHPRH-208ENST00000520752 NABP2Q9BQ15 211 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms