RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
RFC1-214ENST00000512726 NUP210Q8TEM1 1887 aaPredicted RBP3.16□□□□□ -1.9
RFC1-214ENST00000512726 TRGV2A0A075B6R0 118 aa3.16□□□□□ -1.9
RFC1-214ENST00000512726 OR1I1O60431 355 aa3.16□□□□□ -1.9
RFC1-214ENST00000512726 PHF5AQ7RTV0 110 aaKnown RBP3.16□□□□□ -1.9
RFC1-214ENST00000512726 TMEM35BQ8NCS4 154 aa3.16□□□□□ -1.9
RFC1-214ENST00000512726 CCDC115Q96NT0 180 aa3.16□□□□□ -1.9
RFC1-214ENST00000512726 AIF1LQ9BQI0 150 aa3.16□□□□□ -1.9
RFC1-214ENST00000512726 NAT8BQ9UHF3 227 aa3.16□□□□□ -1.9
RFC1-214ENST00000512726 TRAV12-1A0A0B4J245 112 aa3.15□□□□□ -1.91
RFC1-214ENST00000512726 TRBV6-5A0A0K0K1A5 114 aa3.15□□□□□ -1.91
RFC1-214ENST00000512726 C2orf70A6NJV1 201 aa3.15□□□□□ -1.91
RFC1-214ENST00000512726 GABARAPH6UMI1 98 aa3.15□□□□□ -1.91
RFC1-214ENST00000512726 K7ERJ3 54 aa3.15□□□□□ -1.91
RFC1-214ENST00000512726 BRS3P32247 399 aa3.15□□□□□ -1.91
RFC1-214ENST00000512726 RPL35P42766 123 aaKnown RBP3.15□□□□□ -1.91
RFC1-214ENST00000512726 POLR2HP52434 150 aaKnown RBP3.15□□□□□ -1.91
RFC1-214ENST00000512726 EIF3IQ13347 325 aaKnown RBP3.15□□□□□ -1.91
RFC1-214ENST00000512726 PCOTHQ58A44 107 aa3.15□□□□□ -1.91
RFC1-214ENST00000512726 PATE2Q6UY27 113 aa3.15□□□□□ -1.91
RFC1-214ENST00000512726 C12orf29Q8N999 325 aa3.15□□□□□ -1.91
RFC1-214ENST00000512726 OR2T35Q8NGX2 323 aa3.15□□□□□ -1.91
RFC1-214ENST00000512726 SFT2D1Q8WV19 159 aa3.15□□□□□ -1.91
RFC1-214ENST00000512726 MED31Q9Y3C7 131 aa3.15□□□□□ -1.91
RFC1-214ENST00000512726 DIDO1Q9BTC0 2240 aaKnown RBP3.15□□□□□ -1.91
RFC1-214ENST00000512726 PIK3C2AO00443 1686 aa3.14□□□□□ -1.91
RFC1-214ENST00000512726 MYO5AQ9Y4I1 1855 aaKnown RBP3.14□□□□□ -1.91
RFC1-214ENST00000512726 ARL5CA6NH57 179 aa3.14□□□□□ -1.91
RFC1-214ENST00000512726 H7BYZ3 331 aa3.14□□□□□ -1.91
RFC1-214ENST00000512726 RER1O15258 196 aa3.14□□□□□ -1.91
RFC1-214ENST00000512726 LYZL6O75951 148 aa3.14□□□□□ -1.91
RFC1-214ENST00000512726 PDE6HQ13956 83 aa3.14□□□□□ -1.91
RFC1-214ENST00000512726 RETNLBQ9BQ08 111 aa3.14□□□□□ -1.91
RFC1-214ENST00000512726 TCEAL2Q9H3H9 227 aaPredicted RBP3.14□□□□□ -1.91
RFC1-214ENST00000512726 RGS12O14924 1447 aa3.13□□□□□ -1.91
RFC1-214ENST00000512726 OR10J4P0C629 311 aa3.13□□□□□ -1.91
RFC1-214ENST00000512726 RPL7P18124 248 aaKnown RBP3.13□□□□□ -1.91
RFC1-214ENST00000512726 COL5A3P25940 1745 aaPredicted RBP3.13□□□□□ -1.91
RFC1-214ENST00000512726 LOC105371267A0A1B0GV96 52 aa3.12□□□□□ -1.91
RFC1-214ENST00000512726 C17orf112F2Z3M2 114 aa3.12□□□□□ -1.91
RFC1-214ENST00000512726 DHFRP00374 187 aa3.12□□□□□ -1.91
RFC1-214ENST00000512726 SCGB1A1P11684 91 aa3.12□□□□□ -1.91
RFC1-214ENST00000512726 KLRD1Q13241 179 aa3.12□□□□□ -1.91
RFC1-214ENST00000512726 ST6GALNAC3Q8NDV1 305 aa3.12□□□□□ -1.91
RFC1-214ENST00000512726 ZNF625Q96I27 306 aaPredicted RBP3.12□□□□□ -1.91
RFC1-214ENST00000512726 TRAPPC8Q9Y2L5 1435 aa3.11□□□□□ -1.91
RFC1-214ENST00000512726 NDUFA6P56556 154 aa3.11□□□□□ -1.91
RFC1-214ENST00000512726 DEFB113Q30KQ7 82 aa3.11□□□□□ -1.91
RFC1-214ENST00000512726 HRCT1Q6UXD1 115 aa3.11□□□□□ -1.91
RFC1-214ENST00000512726 KRTAP13-1Q8IUC0 172 aa3.11□□□□□ -1.91
RFC1-214ENST00000512726 TMEM254Q8TBM7 123 aa3.11□□□□□ -1.91
RFC1-214ENST00000512726 CHCHD1Q96BP2 118 aaKnown RBP3.11□□□□□ -1.91
RFC1-214ENST00000512726 TRAPPC2LQ9UL33 140 aa3.11□□□□□ -1.91
RFC1-214ENST00000512726 TRPM1Q7Z4N2 1603 aa3.11□□□□□ -1.91
RFC1-214ENST00000512726 BCL9O00512 1426 aa3.1□□□□□ -1.91
RFC1-214ENST00000512726 KPNA4O00629 521 aaPredicted RBP3.1□□□□□ -1.91
RFC1-214ENST00000512726 FABP2P12104 132 aa3.1□□□□□ -1.91
RFC1-214ENST00000512726 SDC2P34741 201 aa3.1□□□□□ -1.91
RFC1-214ENST00000512726 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
RFC1-214ENST00000512726 ROMO1P60602 79 aa3.1□□□□□ -1.91
RFC1-214ENST00000512726 RAB4BP61018 213 aa3.1□□□□□ -1.91
RFC1-214ENST00000512726 C10orf55Q5SWW7 151 aa3.1□□□□□ -1.91
RFC1-214ENST00000512726 COL11A1P12107 1806 aaPredicted RBP3.09□□□□□ -1.91
RFC1-214ENST00000512726 ANKRD31Q8N7Z5 1873 aa3.09□□□□□ -1.91
RFC1-214ENST00000512726 RAB5CP51148 216 aa3.09□□□□□ -1.91
RFC1-214ENST00000512726 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
RFC1-214ENST00000512726 FHAD1B1AJZ9 1412 aa3.09□□□□□ -1.92
RFC1-214ENST00000512726 ARHGEF11O15085 1522 aa3.09□□□□□ -1.92
RFC1-214ENST00000512726 ALPK2Q86TB3 2170 aa3.08□□□□□ -1.92
RFC1-214ENST00000512726 COL4A5P29400 1685 aa3.08□□□□□ -1.92
RFC1-214ENST00000512726 J3KT08 172 aa3.08□□□□□ -1.92
RFC1-214ENST00000512726 RPS3P23396 243 aaKnown RBP eCLIP3.08□□□□□ -1.92
RFC1-214ENST00000512726 RPS28P62857 69 aaKnown RBP3.08□□□□□ -1.92
RFC1-214ENST00000512726 OR5D14Q8NGL3 314 aa3.08□□□□□ -1.92
RFC1-214ENST00000512726 POP5Q969H6 163 aaKnown RBP3.08□□□□□ -1.92
RFC1-214ENST00000512726 ZC2HC1AQ96GY0 325 aa3.08□□□□□ -1.92
RFC1-214ENST00000512726 LXNQ9BS40 222 aa3.08□□□□□ -1.92
RFC1-214ENST00000512726 SPANXCQ9NY87 97 aa3.08□□□□□ -1.92
RFC1-214ENST00000512726 SOX21Q9Y651 276 aaPredicted RBP3.08□□□□□ -1.92
RFC1-214ENST00000512726 IGHV1-58A0A0C4DH39 117 aa3.07□□□□□ -1.92
RFC1-214ENST00000512726 C4orf22Q6V702 233 aa3.07□□□□□ -1.92
RFC1-214ENST00000512726 CLECL1Q8IZS7 167 aa3.07□□□□□ -1.92
RFC1-214ENST00000512726 RASL12Q9NYN1 266 aa3.07□□□□□ -1.92
RFC1-214ENST00000512726 CR1P17927 2039 aa3.07□□□□□ -1.92
RFC1-214ENST00000512726 TCRBV4S1A1TA0A5B7 111 aa3.06□□□□□ -1.92
RFC1-214ENST00000512726 M0R233 179 aa3.06□□□□□ -1.92
RFC1-214ENST00000512726 MT-ND6P03923 174 aa3.06□□□□□ -1.92
RFC1-214ENST00000512726 RTL9Q8NET4 1388 aa3.06□□□□□ -1.92
RFC1-214ENST00000512726 MCEEQ96PE7 176 aa3.06□□□□□ -1.92
RFC1-214ENST00000512726 NAA38Q9BRA0 125 aaKnown RBP3.06□□□□□ -1.92
RFC1-214ENST00000512726 SCN3AQ9NY46 2000 aa3.05□□□□□ -1.92
RFC1-214ENST00000512726 NISCHQ9Y2I1 1504 aa3.05□□□□□ -1.92
RFC1-214ENST00000512726 LYRM1O43325 122 aa3.05□□□□□ -1.92
RFC1-214ENST00000512726 DSCR4P56555 118 aaPredicted RBP3.05□□□□□ -1.92
RFC1-214ENST00000512726 CDK6Q00534 326 aa3.05□□□□□ -1.92
RFC1-214ENST00000512726 C1orf137Q5JT78 98 aa3.05□□□□□ -1.92
RFC1-214ENST00000512726 LINC00305Q7Z4B0 112 aa3.05□□□□□ -1.92
RFC1-214ENST00000512726 FAM216BQ8N7L0 139 aa3.05□□□□□ -1.92
RFC1-214ENST00000512726 TMEM229BQ8NBD8 167 aa3.05□□□□□ -1.92
RFC1-214ENST00000512726 OR4C6Q8NH72 309 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms