RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 ARL5CA6NH57 179 aa2.66□□□□□ -1.98
AP001960.1-201ENST00000506494 C17orf112F2Z3M2 114 aa2.66□□□□□ -1.98
AP001960.1-201ENST00000506494 GABARAPH6UMI1 98 aa2.66□□□□□ -1.98
AP001960.1-201ENST00000506494 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
AP001960.1-201ENST00000506494 DHFRP00374 187 aa2.66□□□□□ -1.98
AP001960.1-201ENST00000506494 FABP2P12104 132 aa2.66□□□□□ -1.98
AP001960.1-201ENST00000506494 RAB4BP61018 213 aa2.66□□□□□ -1.98
AP001960.1-201ENST00000506494 PDE6HQ13956 83 aa2.66□□□□□ -1.98
AP001960.1-201ENST00000506494 PHF5AQ7RTV0 110 aaKnown RBP2.66□□□□□ -1.98
AP001960.1-201ENST00000506494 CHCHD1Q96BP2 118 aaKnown RBP2.66□□□□□ -1.98
AP001960.1-201ENST00000506494 ZCCHC11Q5TAX3 1644 aaKnown RBP2.66□□□□□ -1.98
AP001960.1-201ENST00000506494 DOCK4Q8N1I0 1966 aa2.66□□□□□ -1.98
AP001960.1-201ENST00000506494 MYH7BA7E2Y1 1941 aa2.66□□□□□ -1.98
AP001960.1-201ENST00000506494 POLR2HP52434 150 aaKnown RBP2.65□□□□□ -1.99
AP001960.1-201ENST00000506494 DEFB113Q30KQ7 82 aa2.65□□□□□ -1.99
AP001960.1-201ENST00000506494 C10orf55Q5SWW7 151 aa2.65□□□□□ -1.99
AP001960.1-201ENST00000506494 PATE2Q6UY27 113 aa2.65□□□□□ -1.99
AP001960.1-201ENST00000506494 CCDC115Q96NT0 180 aa2.65□□□□□ -1.99
AP001960.1-201ENST00000506494 NAA38Q9BRA0 125 aaKnown RBP2.65□□□□□ -1.99
AP001960.1-201ENST00000506494 MED31Q9Y3C7 131 aa2.65□□□□□ -1.99
AP001960.1-201ENST00000506494 VWDEQ8N2E2 1590 aa2.65□□□□□ -1.99
AP001960.1-201ENST00000506494 HIVEP2P31629 2446 aa2.64□□□□□ -1.99
AP001960.1-201ENST00000506494 CCDC88CQ9P219 2028 aa2.64□□□□□ -1.99
AP001960.1-201ENST00000506494 FN1P02751 2386 aaKnown RBP2.64□□□□□ -1.99
AP001960.1-201ENST00000506494 H7BYZ3 331 aa2.64□□□□□ -1.99
AP001960.1-201ENST00000506494 KPNA4O00629 521 aaPredicted RBP2.64□□□□□ -1.99
AP001960.1-201ENST00000506494 SDC2P34741 201 aa2.64□□□□□ -1.99
AP001960.1-201ENST00000506494 RAB5CP51148 216 aa2.64□□□□□ -1.99
AP001960.1-201ENST00000506494 CLECL1Q8IZS7 167 aa2.64□□□□□ -1.99
AP001960.1-201ENST00000506494 ST6GALNAC3Q8NDV1 305 aa2.64□□□□□ -1.99
AP001960.1-201ENST00000506494 OR5D14Q8NGL3 314 aa2.64□□□□□ -1.99
AP001960.1-201ENST00000506494 TRAPPC2LQ9UL33 140 aa2.64□□□□□ -1.99
AP001960.1-201ENST00000506494 SBF1O95248 1867 aa2.64□□□□□ -1.99
AP001960.1-201ENST00000506494 RTTNQ86VV8 2226 aa2.64□□□□□ -1.99
AP001960.1-201ENST00000506494 DOCK10Q96BY6 2186 aa2.63□□□□□ -1.99
AP001960.1-201ENST00000506494 M0R233 179 aa2.63□□□□□ -1.99
AP001960.1-201ENST00000506494 RPL7P18124 248 aaKnown RBP2.63□□□□□ -1.99
AP001960.1-201ENST00000506494 ALX1Q15699 326 aa2.63□□□□□ -1.99
AP001960.1-201ENST00000506494 HRCT1Q6UXD1 115 aa2.63□□□□□ -1.99
AP001960.1-201ENST00000506494 ZNF563Q8TA94 476 aa2.63□□□□□ -1.99
AP001960.1-201ENST00000506494 RASL12Q9NYN1 266 aa2.63□□□□□ -1.99
AP001960.1-201ENST00000506494 STRCQ7RTU9 1775 aa2.63□□□□□ -1.99
AP001960.1-201ENST00000506494 UBR2Q8IWV8 1755 aa2.63□□□□□ -1.99
AP001960.1-201ENST00000506494 TAF1LQ8IZX4 1826 aa2.63□□□□□ -1.99
AP001960.1-201ENST00000506494 TCRBV4S1A1TA0A5B7 111 aa2.62□□□□□ -1.99
AP001960.1-201ENST00000506494 MT-ND6P03923 174 aa2.62□□□□□ -1.99
AP001960.1-201ENST00000506494 ROMO1P60602 79 aa2.62□□□□□ -1.99
AP001960.1-201ENST00000506494 CDK5R1Q15078 307 aa2.62□□□□□ -1.99
AP001960.1-201ENST00000506494 C4orf22Q6V702 233 aa2.62□□□□□ -1.99
AP001960.1-201ENST00000506494 C4orf3Q8WVX3 66 aa2.62□□□□□ -1.99
AP001960.1-201ENST00000506494 POP5Q969H6 163 aaKnown RBP2.62□□□□□ -1.99
AP001960.1-201ENST00000506494 LXNQ9BS40 222 aa2.62□□□□□ -1.99
AP001960.1-201ENST00000506494 REG4Q9BYZ8 158 aa2.62□□□□□ -1.99
AP001960.1-201ENST00000506494 GBF1Q92538 1859 aa2.62□□□□□ -1.99
AP001960.1-201ENST00000506494 OR2T8A6NH00 312 aa2.61□□□□□ -1.99
AP001960.1-201ENST00000506494 J3QKU1 62 aa2.61□□□□□ -1.99
AP001960.1-201ENST00000506494 LYRM1O43325 122 aa2.61□□□□□ -1.99
AP001960.1-201ENST00000506494 HYPMO75409 117 aa2.61□□□□□ -1.99
AP001960.1-201ENST00000506494 SCGB1A1P11684 91 aa2.61□□□□□ -1.99
AP001960.1-201ENST00000506494 CDK6Q00534 326 aa2.61□□□□□ -1.99
AP001960.1-201ENST00000506494 C2orf82Q6UX34 121 aa2.61□□□□□ -1.99
AP001960.1-201ENST00000506494 OR4C6Q8NH72 309 aa2.61□□□□□ -1.99
AP001960.1-201ENST00000506494 SPANXCQ9NY87 97 aa2.61□□□□□ -1.99
AP001960.1-201ENST00000506494 SCN8AQ9UQD0 1980 aa2.61□□□□□ -1.99
AP001960.1-201ENST00000506494 BCL9O00512 1426 aa2.6□□□□□ -1.99
AP001960.1-201ENST00000506494 TRAPPC8Q9Y2L5 1435 aa2.6□□□□□ -1.99
AP001960.1-201ENST00000506494 KRTAP12-3P60328 96 aa2.6□□□□□ -1.99
AP001960.1-201ENST00000506494 FAM216BQ8N7L0 139 aa2.6□□□□□ -1.99
AP001960.1-201ENST00000506494 ZC2HC1AQ96GY0 325 aa2.6□□□□□ -1.99
AP001960.1-201ENST00000506494 MCEEQ96PE7 176 aa2.6□□□□□ -1.99
AP001960.1-201ENST00000506494 MED9Q9NWA0 146 aa2.6□□□□□ -1.99
AP001960.1-201ENST00000506494 BRWD1Q9NSI6 2320 aa2.59□□□□□ -1.99
AP001960.1-201ENST00000506494 IGHV1-58A0A0C4DH39 117 aa2.59□□□□□ -1.99
AP001960.1-201ENST00000506494 J3KT08 172 aa2.59□□□□□ -1.99
AP001960.1-201ENST00000506494 MRPS14O60783 128 aaKnown RBP2.59□□□□□ -1.99
AP001960.1-201ENST00000506494 C1orf137Q5JT78 98 aa2.59□□□□□ -1.99
AP001960.1-201ENST00000506494 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
AP001960.1-201ENST00000506494 LINC00305Q7Z4B0 112 aa2.59□□□□□ -1.99
AP001960.1-201ENST00000506494 MUCL1Q96DR8 90 aa2.59□□□□□ -1.99
AP001960.1-201ENST00000506494 TP53RKQ96S44 253 aa2.59□□□□□ -1.99
AP001960.1-201ENST00000506494 ARHGEF11O15085 1522 aa2.58□□□□□ -2
AP001960.1-201ENST00000506494 ADGBQ8N7X0 1667 aa2.58□□□□□ -2
AP001960.1-201ENST00000506494 LOC105371267A0A1B0GV96 52 aa2.58□□□□□ -2
AP001960.1-201ENST00000506494 RPS3P23396 243 aaKnown RBP eCLIP2.58□□□□□ -2
AP001960.1-201ENST00000506494 DSCR4P56555 118 aaPredicted RBP2.58□□□□□ -2
AP001960.1-201ENST00000506494 RPS28P62857 69 aaKnown RBP2.58□□□□□ -2
AP001960.1-201ENST00000506494 Q8N2B8 174 aa2.58□□□□□ -2
AP001960.1-201ENST00000506494 OR4B1Q8NGF8 309 aa2.58□□□□□ -2
AP001960.1-201ENST00000506494 RAB37Q96AX2 223 aa2.58□□□□□ -2
AP001960.1-201ENST00000506494 HYLS1Q96M11 299 aa2.58□□□□□ -2
AP001960.1-201ENST00000506494 KLK9Q9UKQ9 250 aa2.58□□□□□ -2
AP001960.1-201ENST00000506494 SOX21Q9Y651 276 aaPredicted RBP2.58□□□□□ -2
AP001960.1-201ENST00000506494 ANAPC1Q9H1A4 1944 aa2.58□□□□□ -2
AP001960.1-201ENST00000506494 RP1P56715 2156 aa2.57□□□□□ -2
AP001960.1-201ENST00000506494 IGKV2D-26A0A0A0MRZ7 120 aa2.57□□□□□ -2
AP001960.1-201ENST00000506494 TRBV6-8A0A0A6YYG3 113 aa2.57□□□□□ -2
AP001960.1-201ENST00000506494 TRAV10A0A0B4J240 114 aa2.57□□□□□ -2
AP001960.1-201ENST00000506494 CCDC160A6NGH7 325 aa2.57□□□□□ -2
AP001960.1-201ENST00000506494 E7EUB6 86 aa2.57□□□□□ -2
AP001960.1-201ENST00000506494 RNASE3P12724 160 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms