RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 TPT1P8Q9HAU6 139 aa2.09□□□□□ -2.07
SMARCAD1-205ENST00000506089 RPL26L1Q9UNX3 145 aaKnown RBP2.09□□□□□ -2.07
SMARCAD1-205ENST00000506089 HIGD1AQ9Y241 93 aa2.09□□□□□ -2.07
SMARCAD1-205ENST00000506089 NISCHQ9Y2I1 1504 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 SHANK1Q9Y566 2161 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 IGLV3-9A0A075B6K5 115 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 SPRR5A0A1B0GTR4 108 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 K7ERJ3 54 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 RER1O15258 196 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 IGKV1-17P01599 117 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 BAALC-AS2P0C853 105 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 UBBP0CG47 229 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 ZNF705BP0CI00 300 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 SDC4P31431 198 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 SS18Q15532 418 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 ESRGQ1W209 222 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 PATE2Q6UY27 113 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 OR51A4Q8NGJ6 313 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 MAGOHBQ96A72 148 aaKnown RBP2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 C14orf132Q9NPU4 83 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 COL1A2P08123 1366 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 RTL9Q8NET4 1388 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 STRCQ7RTU9 1775 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 NCOA3Q9Y6Q9 1424 aa2.08□□□□□ -2.08
SMARCAD1-205ENST00000506089 SCN8AQ9UQD0 1980 aa2.07□□□□□ -2.08
SMARCAD1-205ENST00000506089 IGKV1D-42A0A075B6H8 117 aa2.07□□□□□ -2.08
SMARCAD1-205ENST00000506089 IGKV1D-17A0A075B6S4 117 aa2.07□□□□□ -2.08
SMARCAD1-205ENST00000506089 TRAV13-1A0A0B4J241 112 aa2.07□□□□□ -2.08
SMARCAD1-205ENST00000506089 NDUFA2O43678 99 aa2.07□□□□□ -2.08
SMARCAD1-205ENST00000506089 PROSCO94903 275 aa2.07□□□□□ -2.08
SMARCAD1-205ENST00000506089 P0C880 135 aa2.07□□□□□ -2.08
SMARCAD1-205ENST00000506089 KLRD1Q13241 179 aa2.07□□□□□ -2.08
SMARCAD1-205ENST00000506089 LRRC28Q86X40 367 aaPredicted RBP2.07□□□□□ -2.08
SMARCAD1-205ENST00000506089 OR4B1Q8NGF8 309 aa2.07□□□□□ -2.08
SMARCAD1-205ENST00000506089 OR4K15Q8NH41 348 aa2.07□□□□□ -2.08
SMARCAD1-205ENST00000506089 SOGA1O94964 1423 aa2.07□□□□□ -2.08
SMARCAD1-205ENST00000506089 ADAMTS7Q9UKP4 1686 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 LTBP2Q14767 1821 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 TRBV27A0A0K0K1C4 114 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 IBA57-AS1B1ANH7 110 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 H3BMG7 143 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 LY6LH3BQJ8 138 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 PGLYRP1O75594 196 aaPredicted RBP2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 PAEPP09466 180 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 MPC1LP0DKB6 136 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 MIFP14174 115 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 RPL22P35268 128 aaKnown RBP2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 TAF9Q16594 264 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 HCP5Q6MZN7 132 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 C7orf65Q6ZTY9 151 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 LINC00301Q8NCQ3 95 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 OR5A2Q8NGI9 324 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 OR5H6Q8NGV6 325 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 PRELID3AQ96N28 172 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 CBLN4Q9NTU7 201 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 LY96Q9Y6Y9 160 aa2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 TCOF1Q13428 1488 aaKnown RBP2.06□□□□□ -2.08
SMARCAD1-205ENST00000506089 MEIKINA0A087WXM9 373 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 SDHAF1A6NFY7 115 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 C17orf112F2Z3M2 114 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 MT-ND6P03923 174 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 MGST1P10620 155 aaKnown RBP2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 EVI2AP22794 236 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 ZNF181Q2M3W8 571 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 Q5XG85 94 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 TEX29Q8N6K0 151 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 FAM216BQ8N7L0 139 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 RNASE11Q8TAA1 199 aaKnown RBP2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 ZNF418Q8TF45 676 aaPredicted RBP2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 ZC2HC1AQ96GY0 325 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 AP1S3Q96PC3 154 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 SLC50A1Q9BRV3 221 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 TIMM21Q9BVV7 248 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 CXCL16Q9H2A7 254 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 LHFPL6Q9Y693 200 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 ARHGEF11O15085 1522 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 ANAPC1Q9H1A4 1944 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 KIAA2026Q5HYC2 2103 aa2.05□□□□□ -2.08
SMARCAD1-205ENST00000506089 TRAV3A0A0B4J244 114 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 TRAV1-1A0A0B4J248 108 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 OVOS2A0A0J9YW53 1432 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 A0A1B0GW64 132 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 ZNF705FA8MVS1 300 aaPredicted RBP2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 RTEL1-TNFRSF6BF6WH68 1400 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 LYRM1O43325 122 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 OR1I1O60431 355 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 FRMPD1Q5SYB0 1578 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 OVOS2Q6IE36 1432 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 OR4S1Q8NGB4 309 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 BRK1Q8WUW1 75 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 NAT14Q8WUY8 206 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 CHCHD1Q96BP2 118 aaKnown RBP2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 RETNLBQ9BQ08 111 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 CST9LQ9H4G1 147 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 BICRAQ9NZM4 1560 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 CALML5Q9NZT1 146 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 KIAA1107Q9UPP5 1409 aa2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 MYO5AQ9Y4I1 1855 aaKnown RBP2.04□□□□□ -2.08
SMARCAD1-205ENST00000506089 COL4A2P08572 1712 aa2.03□□□□□ -2.08
SMARCAD1-205ENST00000506089 GLI3P10071 1580 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms