RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 OR1L6Q8NGR2 347 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 OR10J6PQ8NGY7 276 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 OR4X1Q8NH49 305 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 OR4A5Q8NH83 315 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 SLC25A40Q8TBP6 338 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 OR5P3Q8WZ94 311 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 AQP3Q92482 292 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 CHCHD1Q96BP2 118 aaKnown RBP1.47□□□□□ -2.17
HMGN1-218ENST00000490032 GALMQ96C23 342 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 GPR146Q96CH1 333 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 SMIM19Q96E16 107 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 ADAT3Q96EY9 351 aaPredicted RBP1.47□□□□□ -2.17
HMGN1-218ENST00000490032 GPR82Q96P67 336 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 AGMATQ9BSE5 352 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 GGTLC1Q9BX51 225 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 SLC25A2Q9BXI2 301 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 SMIM3Q9BZL3 60 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 IMUPQ9GZP8 106 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 CHST6Q9GZX3 395 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 NAA60Q9H7X0 242 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 CBLN4Q9NTU7 201 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 JPT1Q9UK76 154 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 PCTPQ9UKL6 214 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 SLC17A4Q9Y2C5 497 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 LSM2Q9Y333 95 aaKnown RBP1.47□□□□□ -2.17
HMGN1-218ENST00000490032 SIGLEC9Q9Y336 463 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 HES2Q9Y543 173 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 LY96Q9Y6Y9 160 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 V9GYY9 64 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 CCDC88CQ9P219 2028 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 RANBP2P49792 3224 aaKnown RBP1.47□□□□□ -2.17
HMGN1-218ENST00000490032 SZT2Q5T011 3432 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 CHD8Q9HCK8 2581 aa1.47□□□□□ -2.17
HMGN1-218ENST00000490032 CACNA1BQ00975 2339 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 ANK1P16157 1881 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 COL4A1P02462 1669 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 CACNA1GO43497 2377 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 NUP98P52948 1817 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 IGLV3-22A0A075B6J6 115 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 TRAV26-1A0A087WT03 109 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 IGHV2-26A0A0B4J1V2 119 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 TRAV5A0A0B4J249 113 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 KBTBD11-OT1A0A1B0GTJ5 212 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 IGLC7A0M8Q6 106 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 ODAMA1E959 279 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 CD300LBA8K4G0 201 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 CEBPZOSA8MTT3 80 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 LOC730098B7Z3J9 87 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF878C9JN71 531 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 J3KT08 172 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 FXYD1O00168 92 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 FCN3O75636 299 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 NDUFB2O95178 105 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 OR2H2O95918 312 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 TRACP01848 142 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 APCSP02743 223 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 CD3DP04234 171 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 C8orf88P0DMB2 117 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 IGLC2P0DOY2 106 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 IGLC3P0DOY3 106 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 SLC25A6P12236 298 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 CYBAP13498 195 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 CPMP14384 443 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 ALOX5APP20292 161 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 FKBP2P26885 142 aaKnown RBP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 NBL1P41271 181 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 GPR1P46091 355 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 GPR6P46095 362 aaPredicted RBP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 DUSP3P51452 185 aaPredicted RBP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 SUB1P53999 127 aaKnown RBP eCLIP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 H2BFSP57053 126 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 YPEL3P61236 119 aaPredicted RBP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 RPS23P62266 143 aaKnown RBP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 RPS11P62280 158 aaKnown RBP eCLIP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 RHOBP62745 196 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 GNG3P63215 75 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 MRPS36P82909 103 aaKnown RBP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 MEF2CQ06413 473 aaPredicted RBP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 KLRB1Q12918 225 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 IHHQ14623 411 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 OR1Q1Q15612 314 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 MEIG1Q5JSS6 88 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 SYPL2Q5VXT5 272 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 NCBP2-AS2Q69YL0 99 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 TEX43Q6ZNM6 134 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 TCF23Q7RTU1 214 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF683Q8IZ20 524 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 MUC15Q8N387 334 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 C10orf126Q8N4M7 172 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 CYB561A3Q8NBI2 242 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 GPR32P1Q8NGA4 272 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 OR8B3Q8NGG8 313 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 OR4C13Q8NGP0 309 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 ATP6V0E2Q8NHE4 81 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 SGMS2Q8NHU3 365 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF502Q8TBZ5 544 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 LGALS14Q8TCE9 139 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 NRGNQ92686 78 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms