RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 FBN3Q75N90 2809 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 IGHV1-58A0A0C4DH39 117 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 TRBV7-6A0A0J9YX20 115 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 ODAMA1E959 279 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR51F1A6NGY5 319 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 A8MWV9 139 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 C9JAW5 83 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 H7BYZ3 331 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 TNFSF15O95150 251 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 ANGP03950 147 aaKnown RBP1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 UBBP0CG47 229 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 ZNF705BP0CI00 300 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 CRYGAP11844 174 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 SDC4P31431 198 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 DYNLT1P63172 113 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 TPRXLQ17RH7 258 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 VMA21Q3ZAQ7 101 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 TMEM155Q4W5P6 130 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 MORN2Q502X0 79 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 SPANXN5Q5MJ07 72 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 SOSTDC1Q6X4U4 206 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 PHF5AQ7RTV0 110 aaKnown RBP1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 LINC00305Q7Z4B0 112 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR8J3Q8NGG0 315 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR8B3Q8NGG8 313 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR4K15Q8NH41 348 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 AQP3Q92482 292 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 MAGOHBQ96A72 148 aaKnown RBP1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 AP1S3Q96PC3 154 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 MCEEQ96PE7 176 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 TPT1P8Q9HAU6 139 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 HIGD1AQ9Y241 93 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 RNF11Q9Y3C5 154 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 SCN9AQ15858 1988 aa1.34□□□□□ -2.2
HMGB1P36-201ENST00000487709 CHD5Q8TDI0 1954 aa1.34□□□□□ -2.2
HMGB1P36-201ENST00000487709 SOGA1O94964 1423 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 TRAPPC8Q9Y2L5 1435 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 A2MP01023 1474 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 CEP152O94986 1710 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 TRAV13-1A0A0B4J241 112 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 RER1O15258 196 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 TIMM17BO60830 172 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 SULT1C4O75897 302 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 OR2H2O95918 312 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 PMP2P02689 132 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 C1QCP02747 245 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 MT-ND6P03923 174 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 PRB1P04280 392 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 MPC1LP0DKB6 136 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 C4orf22Q6V702 233 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 Q6ZSA8 131 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 OR51A4Q8NGJ6 313 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 VPS25Q9BRG1 176 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 BCL2L10Q9HD36 194 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 TAS2R4Q9NYW5 299 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 SOX21Q9Y651 276 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 KIF1BO60333 1816 aa1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 NYNRINQ9P2P1 1898 aaKnown RBP1.33□□□□□ -2.2
HMGB1P36-201ENST00000487709 MED13Q9UHV7 2174 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 RGS12O14924 1447 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 SCAF11Q99590 1463 aaKnown RBP1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 CEP164Q9UPV0 1460 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 SLX4Q8IY92 1834 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 LOC107984640A0A0U1RRK4 108 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 H3BMG7 143 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 J3QR89 54 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 M0R2Z0 102 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 NDUFA2O43678 99 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 PGLYRP1O75594 196 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 PROSCO94903 275 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 CRPP02741 224 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 CLPSP04118 112 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 BAALC-AS2P0C853 105 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 EVI2AP22794 236 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 LSM3P62310 102 aaKnown RBP1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 KLRD1Q13241 179 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 ZNF345Q14585 488 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 ELOBQ15370 118 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 ESRGQ1W209 222 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 Q6ZQT0 140 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 OR4B1Q8NGF8 309 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 OR5H6Q8NGV6 325 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 PRELID3AQ96N28 172 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 CYSTM1Q9H1C7 97 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 C14orf132Q9NPU4 83 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 CBLN4Q9NTU7 201 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 CALML5Q9NZT1 146 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 LY96Q9Y6Y9 160 aa1.32□□□□□ -2.2
HMGB1P36-201ENST00000487709 ERCC6Q03468 1493 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 RIMBP3CA6NJZ7 1639 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 RIMBP3BA6NNM3 1639 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 RIMBP3Q9UFD9 1639 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 IGKV2-40A0A087WW87 121 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 TRBV27A0A0K0K1C4 114 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 C5orf58C9J3I9 102 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 K7ERJ3 54 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 LYRM1O43325 122 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 TPST1O60507 370 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 ZNF737O75373 536 aa1.31□□□□□ -2.2
HMGB1P36-201ENST00000487709 IGKV2D-40P01614 121 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms