RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 MYH10P35580 1976 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 KDM6AO15550 1401 aaPredicted RBP0.53□□□□□ -2.32
GCFC2-209ENST00000486016 ZNF469Q96JG9 3925 aaPredicted RBP0.52□□□□□ -2.33
GCFC2-209ENST00000486016 KIAA1549Q9HCM3 1950 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 MUC5BQ9HC84 5762 aaPredicted RBP0.52□□□□□ -2.33
GCFC2-209ENST00000486016 H7C1C5 153 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 IGLV1-51P01701 117 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 PHBP35232 272 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 INSL3P51460 131 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 LCN6P62502 163 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 CDK6Q00534 326 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 AKR1C8PQ5T2L2 129 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 Q8TAT8 98 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 POP5Q969H6 163 aaKnown RBP0.52□□□□□ -2.33
GCFC2-209ENST00000486016 ZHX1-C8orf76Q96EF9 292 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 PAIP2Q9BPZ3 127 aaKnown RBP0.52□□□□□ -2.33
GCFC2-209ENST00000486016 GGACTQ9BVM4 153 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 PSTPIP2Q9H939 334 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 POPDC3Q9HBV1 291 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 SS18L2Q9UHA2 77 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 COL1A1P02452 1464 aaPredicted RBP0.52□□□□□ -2.33
GCFC2-209ENST00000486016 CEP164Q9UPV0 1460 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 PEAK1Q9H792 1746 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 LAMA4Q16363 1823 aa0.52□□□□□ -2.33
GCFC2-209ENST00000486016 A0A087WSZ3 146 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 C17orf112F2Z3M2 114 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 F8W1H4 67 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 M0R233 179 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 ERC2-IT1O76042 136 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 CXCL1P09341 107 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 OR10J4P0C629 311 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 EFNA4P52798 201 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 RPL19P84098 196 aaKnown RBP0.51□□□□□ -2.33
GCFC2-209ENST00000486016 SNCBQ16143 134 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 SCGB2B2Q4G0G5 96 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 GRINAQ7Z429 371 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 OR5D16Q8NGK9 328 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 OR4K15Q8NH41 348 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 RAB37Q96AX2 223 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 MUCL1Q96DR8 90 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 LYSMD1Q96S90 227 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 TMEM70Q9BUB7 260 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 OR2J1Q9GZK6 312 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 PBOV1Q9GZY1 135 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 SH3BGRL3Q9H299 93 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 LYRM2Q9NU23 88 aaPredicted RBP0.51□□□□□ -2.33
GCFC2-209ENST00000486016 SSR3Q9UNL2 185 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
GCFC2-209ENST00000486016 DOCK4Q8N1I0 1966 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 CECR2Q9BXF3 1484 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 RIIAD1A6NNX1 92 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 IFNA1P01562 189 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 TRGC2P03986 189 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 CXCL8P10145 99 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 RAB5CP51148 216 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 TMBIM6P55061 237 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 ARPP19P56211 112 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 HAGHLQ6PII5 290 aaPredicted RBP0.5□□□□□ -2.33
GCFC2-209ENST00000486016 TEN1Q86WV5 123 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 GKN2Q86XP6 184 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 PLPP5Q8NEB5 264 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 OR13C6PQ8NH95 151 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 AP3S1Q92572 193 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 CHCHD1Q96BP2 118 aaKnown RBP0.5□□□□□ -2.33
GCFC2-209ENST00000486016 ZNF714Q96N38 554 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 GPX7Q96SL4 187 aaPredicted RBP0.5□□□□□ -2.33
GCFC2-209ENST00000486016 GINS3Q9BRX5 216 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 STOML2Q9UJZ1 356 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 EML5Q05BV3 1969 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 CASP8AP2Q9UKL3 1982 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 PLXNA4Q9HCM2 1894 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 NUP98P52948 1817 aa0.5□□□□□ -2.33
GCFC2-209ENST00000486016 UHRF1BP1Q6BDS2 1440 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 HEATR1Q9H583 2144 aaKnown RBP0.49□□□□□ -2.33
GCFC2-209ENST00000486016 EIF3AQ14152 1382 aaKnown RBP0.49□□□□□ -2.33
GCFC2-209ENST00000486016 ODAMA1E959 279 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 H3BRM9 83 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 K7ERJ3 54 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 MFSD11O43934 449 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 IFNA14P01570 189 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 APOA2P02652 100 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 PRB4P10163 310 aaPredicted RBP0.49□□□□□ -2.33
GCFC2-209ENST00000486016 COX7CP15954 63 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 OGNP20774 298 aaKnown RBP0.49□□□□□ -2.33
GCFC2-209ENST00000486016 GNG3P63215 75 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 KLRD1Q13241 179 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 MSMO1Q15800 293 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 TMED4Q7Z7H5 227 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 LYG2Q86SG7 212 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 SBSPONQ8IVN8 264 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 IFT20Q8IY31 132 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 SMIM20Q8N5G0 67 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 CDC26Q8NHZ8 85 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 PPTC7Q8NI37 304 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 ZNF431Q8TF32 576 aaPredicted RBP0.49□□□□□ -2.33
GCFC2-209ENST00000486016 ZC2HC1AQ96GY0 325 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 PBDC1Q9BVG4 233 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 CCDC94Q9BW85 323 aaPredicted RBP0.49□□□□□ -2.33
GCFC2-209ENST00000486016 CACYBPQ9HB71 228 aaKnown RBP0.49□□□□□ -2.33
GCFC2-209ENST00000486016 TNFSF18Q9UNG2 199 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms