RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 GATA3P23771 443 aa7.64□□□□□ -1.19
USP39-214ENST00000474572 ECSCRQ19T08 205 aa7.64□□□□□ -1.19
USP39-214ENST00000474572 TMEM136Q6ZRR5 245 aa7.64□□□□□ -1.19
USP39-214ENST00000474572 BCL6BQ8N143 479 aaPredicted RBP7.64□□□□□ -1.19
USP39-214ENST00000474572 TMEM75Q8N9X5 138 aa7.64□□□□□ -1.19
USP39-214ENST00000474572 NHLRC2Q8NBF2 726 aa7.64□□□□□ -1.19
USP39-214ENST00000474572 MRPL18Q9H0U6 180 aaKnown RBP7.64□□□□□ -1.19
USP39-214ENST00000474572 TRAV20A0A0B4J274 112 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 SERTM2A0A1B0GWG4 89 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 A6NDX4 124 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 OR2T8A6NH00 312 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 LINC01548A6NM66 108 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 SNURFLB1AK76 121 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 B4DSR2 109 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 H3BTX0 84 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 AMBPP02760 352 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 IGF1P05019 195 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 IGHV4-38-2P0DP08 117 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 ESDP10768 282 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 S100A7P31151 101 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 RHOGP84095 191 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 EXOC3-AS1Q8N2X6 119 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 OR10D4PQ8NGN7 298 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 TSKUQ8WUA8 353 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 CCDC140Q96MF4 163 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 C17orf77Q96MU5 243 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 TMUB1Q9BVT8 246 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 RABAC1Q9UI14 185 aa7.63□□□□□ -1.19
USP39-214ENST00000474572 A0A087X0K7 114 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 TRBV7-1A0A0A6YYK4 115 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 A0A1B0GXF2 115 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 FAM231BA6NCW3 169 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 H3BUA1 57 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 BMPR1BO00238 502 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 IGHV3-23P01764 117 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 HLA-DQA1P01909 254 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 FRMD6-AS1P0C7T7 363 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 FABP4P15090 132 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 RPL7P18124 248 aaKnown RBP7.62□□□□□ -1.19
USP39-214ENST00000474572 IER3P46695 156 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 RAB9AP51151 201 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 Q0VG73 95 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 C15orf32Q32M92 178 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 PDZD11Q5EBL8 140 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 BRD3OSQ6XYD6 125 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 LINC00322Q6ZN03 302 aaPredicted RBP7.62□□□□□ -1.19
USP39-214ENST00000474572 COX8CQ7Z4L0 72 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 GBGT1Q8N5D6 347 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 OR4B1Q8NGF8 309 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 CMTM2Q8TAZ6 248 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 EEF1AKMT3Q96AZ1 226 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 PACRGQ96M98 296 aaPredicted RBP7.62□□□□□ -1.19
USP39-214ENST00000474572 GFRA4Q9GZZ7 299 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 RPP21Q9H633 154 aaKnown RBP7.62□□□□□ -1.19
USP39-214ENST00000474572 NIT2Q9NQR4 276 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 NAT8BQ9UHF3 227 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 ZNF580Q9UK33 172 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 TP53TG3Q9ULZ0 132 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 RPH3ALQ9UNE2 315 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 ZFP30Q9Y2G7 519 aa7.62□□□□□ -1.19
USP39-214ENST00000474572 IGHV3OR16-10A0A075B7F0 116 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 TRAV41A0A0B4J266 112 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 FBLL1A6NHQ2 334 aaKnown RBP7.61□□□□□ -1.19
USP39-214ENST00000474572 FAM223BA6NKX1 122 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 ZNF785A8K8V0 405 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 DIRC3C9JPN6 131 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 G3V318 75 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 M0QZK8 103 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 CA1P00915 261 aaPredicted RBP7.61□□□□□ -1.19
USP39-214ENST00000474572 IGHG2P01859 326 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 COX6B1P14854 86 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 GPR183P32249 361 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 LINC00310P59036 64 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 PSG9Q00887 426 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 PSG3Q16557 428 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 TOMM20LQ6UXN7 152 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 GOLT1AQ6ZVE7 132 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 ATP5L2Q7Z4Y8 100 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 FAM223AQ8IWN6 122 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 NUP35Q8NFH5 326 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 NEU1Q99519 415 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 SERTAD4Q9NUC0 356 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 PSG8Q9UQ74 426 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 SOX21Q9Y651 276 aaPredicted RBP7.61□□□□□ -1.19
USP39-214ENST00000474572 SMAD5-AS1Q9Y6J3 95 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 U3KQE9 123 aa7.61□□□□□ -1.19
USP39-214ENST00000474572 DOPEY1Q5JWR5 2465 aa7.6□□□□□ -1.19
USP39-214ENST00000474572 TRAV8-1A0A0A6YYK1 113 aa7.6□□□□□ -1.19
USP39-214ENST00000474572 CLPSL1A2RUU4 121 aa7.6□□□□□ -1.19
USP39-214ENST00000474572 SH2D7A6NKC9 451 aaPredicted RBP7.6□□□□□ -1.19
USP39-214ENST00000474572 A8MWL6 223 aa7.6□□□□□ -1.19
USP39-214ENST00000474572 J3QLI3 93 aa7.6□□□□□ -1.19
USP39-214ENST00000474572 K7EQM0 130 aa7.6□□□□□ -1.19
USP39-214ENST00000474572 PPIFP30405 207 aaKnown RBP7.6□□□□□ -1.19
USP39-214ENST00000474572 TCL1AP56279 114 aa7.6□□□□□ -1.19
USP39-214ENST00000474572 JOSD1Q15040 202 aaPredicted RBP7.6□□□□□ -1.19
USP39-214ENST00000474572 PRR27Q6MZM9 219 aa7.6□□□□□ -1.19
USP39-214ENST00000474572 TMEM219Q86XT9 240 aa7.6□□□□□ -1.19
USP39-214ENST00000474572 OR5R1Q8NH85 324 aa7.6□□□□□ -1.19
USP39-214ENST00000474572 TMEM18Q96B42 140 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms