RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ZNF80P51504 273 aaPredicted RBP2.68□□□□□ -1.98
UBR3-208ENST00000474426 EFNA4P52798 201 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 CCL20P78556 96 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 HES3Q5TGS1 186 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 EBLN2Q6P2I7 272 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 IGFL3Q6UXB1 125 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 AMN1Q8IY45 258 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 GEMIN6Q8WXD5 167 aaKnown RBP2.68□□□□□ -1.98
UBR3-208ENST00000474426 KXD1Q9BQD3 176 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 R3HDMLQ9H3Y0 253 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 ESM1Q9NQ30 184 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 LINC00527Q9UJ94 153 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 PXDNQ92626 1479 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 RREB1Q92766 1687 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 hDV102S1A0JD36 115 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 IGLL5B9A064 214 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 LST1O00453 97 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 CPSF4O95639 269 aaKnown RBP2.68□□□□□ -1.98
UBR3-208ENST00000474426 CSRP3P50461 194 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 IL17AQ16552 155 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 PRNTQ86SH4 94 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 C4orf45Q96LM5 186 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 PARP12Q9H0J9 701 aaKnown RBP2.68□□□□□ -1.98
UBR3-208ENST00000474426 LIME1Q9H400 295 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 SZT2Q5T011 3432 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 SLIT1O75093 1534 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 LRP6O75581 1613 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.68□□□□□ -1.98
UBR3-208ENST00000474426 ZNF73O43830 326 aaPredicted RBP2.68□□□□□ -1.98
UBR3-208ENST00000474426 LINC00313P59037 77 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 NPC2P61916 151 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 ORMDL2Q53FV1 153 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 Q6ZPA2 131 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 RFESDQ8TAC1 157 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 IL1F10Q8WWZ1 152 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 OR2A5Q96R48 311 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 PLEKHA3Q9HB20 300 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 V9GY05 133 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 SNURFLB1AK76 121 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 SMIM22K7EJ46 135 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 M0R381 172 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 ANGPTL7O43827 346 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 SLC25A16P16260 332 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 HIST1H4AP62805 103 aaKnown RBP2.68□□□□□ -1.98
UBR3-208ENST00000474426 SPANXN4Q5MJ08 99 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 TREML4Q6UXN2 200 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 BAGE3Q86Y29 109 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 BAGE2Q86Y30 109 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 PRSS33Q8NF86 280 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 OR8A1Q8NGG7 326 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 CNRIP1Q96F85 164 aaPredicted RBP2.68□□□□□ -1.98
UBR3-208ENST00000474426 THSD7BQ9C0I4 1608 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 ARHGEF17Q96PE2 2063 aaPredicted RBP2.67□□□□□ -1.98
UBR3-208ENST00000474426 CPAMD8Q8IZJ3 1885 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 RBMY1BA6NDE4 496 aaKnown RBP2.67□□□□□ -1.98
UBR3-208ENST00000474426 RBMY1EA6NEQ0 496 aaKnown RBP2.67□□□□□ -1.98
UBR3-208ENST00000474426 H0Y9J4 135 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 C16orf97H3BN30 126 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 JTBO76095 146 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 RBMY1DP0C7P1 496 aaKnown RBP2.67□□□□□ -1.98
UBR3-208ENST00000474426 RBMY1A1P0DJD3 496 aaKnown RBP2.67□□□□□ -1.98
UBR3-208ENST00000474426 ABCA11PQ4W5N1 156 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 FGF13Q92913 245 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 TRAV8-1A0A0A6YYK1 113 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 TRAV17A0A0B4J275 112 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 K7ERJ3 54 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 MTPNP58546 118 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 MAPKAPK5-AS1Q8N8E1 139 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 NMES1Q9C002 83 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 PLAC1Q9HBJ0 212 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 DDX60LQ5H9U9 1706 aaKnown RBP2.67□□□□□ -1.98
UBR3-208ENST00000474426 LOC100131303A0A0U1RQF7 123 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 FAM181BA6NEQ2 426 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 NDUFS5O43920 106 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 APCSP02743 223 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 SSR2P43308 183 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 DPTQ07507 201 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 Q6ZSV7 163 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 CLDND2Q8NHS1 167 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 TSKUQ8WUA8 353 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 Q9HAA7 133 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 LINC00588Q9Y4M8 146 aa2.67□□□□□ -1.98
UBR3-208ENST00000474426 GOLGB1Q14789 3259 aaKnown RBP2.66□□□□□ -1.98
UBR3-208ENST00000474426 LOC285556D6RIA3 1793 aa2.66□□□□□ -1.98
UBR3-208ENST00000474426 AGRNO00468 2067 aa2.66□□□□□ -1.98
UBR3-208ENST00000474426 NDUFS7O75251 213 aa2.66□□□□□ -1.98
UBR3-208ENST00000474426 INSL4Q14641 139 aa2.66□□□□□ -1.98
UBR3-208ENST00000474426 CLEC19AQ6UXS0 136 aa2.66□□□□□ -1.98
UBR3-208ENST00000474426 CD177Q8N6Q3 437 aa2.66□□□□□ -1.98
UBR3-208ENST00000474426 GVQW1Q8N7I0 195 aa2.66□□□□□ -1.98
UBR3-208ENST00000474426 RNASE6Q93091 150 aaKnown RBP2.66□□□□□ -1.98
UBR3-208ENST00000474426 CMC2Q9NRP2 79 aa2.66□□□□□ -1.98
UBR3-208ENST00000474426 TNS1Q9HBL0 1735 aaKnown RBP2.66□□□□□ -1.98
UBR3-208ENST00000474426 PLXNA3P51805 1871 aa2.66□□□□□ -1.98
UBR3-208ENST00000474426 BAZ2BQ9UIF8 2168 aaKnown RBP2.66□□□□□ -1.98
UBR3-208ENST00000474426 MAST2Q6P0Q8 1798 aa2.66□□□□□ -1.98
UBR3-208ENST00000474426 A0A087WZ39 114 aa2.66□□□□□ -1.98
UBR3-208ENST00000474426 TRAV8-3A0A0A6YYJ7 113 aa2.66□□□□□ -1.98
UBR3-208ENST00000474426 SSSCA1O60232 199 aa2.66□□□□□ -1.98
UBR3-208ENST00000474426 PTHLHP12272 177 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms