RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 ODF3Q96PU9 254 aa0.91□□□□□ -2.26
SSB-209ENST00000470621 HIST1H2BLQ99880 126 aa0.91□□□□□ -2.26
SSB-209ENST00000470621 C6orf62Q9GZU0 229 aaPredicted RBP0.91□□□□□ -2.26
SSB-209ENST00000470621 MED9Q9NWA0 146 aa0.91□□□□□ -2.26
SSB-209ENST00000470621 GSKIPQ9P0R6 139 aa0.91□□□□□ -2.26
SSB-209ENST00000470621 HSPB11Q9Y547 144 aa0.91□□□□□ -2.26
SSB-209ENST00000470621 NUBP2Q9Y5Y2 271 aa0.91□□□□□ -2.26
SSB-209ENST00000470621 NUP98P52948 1817 aa0.91□□□□□ -2.26
SSB-209ENST00000470621 GLI3P10071 1580 aa0.91□□□□□ -2.26
SSB-209ENST00000470621 COL4A5P29400 1685 aa0.91□□□□□ -2.26
SSB-209ENST00000470621 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.26
SSB-209ENST00000470621 TRPM1Q7Z4N2 1603 aa0.9□□□□□ -2.26
SSB-209ENST00000470621 TRAV36DV7A0A075B6V5 113 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 TRAV3A0A0B4J244 114 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 MEIS3P1A6NDR6 274 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 E7EQ34 232 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 SLC22A1O15245 554 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 IGLV1-51P01701 117 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 HMGN1P05114 100 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 S100A4P26447 101 aaKnown RBP0.9□□□□□ -2.27
SSB-209ENST00000470621 YPEL3P61236 119 aaPredicted RBP0.9□□□□□ -2.27
SSB-209ENST00000470621 RTL8BQ17RB0 113 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 SCGB2B2Q4G0G5 96 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 C22orf39Q6P5X5 142 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 LCN15Q6UWW0 184 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 PHF5AQ7RTV0 110 aaKnown RBP0.9□□□□□ -2.27
SSB-209ENST00000470621 MED12LQ86YW9 2145 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 LRRC18Q8N456 261 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 ZNF418Q8TF45 676 aaPredicted RBP0.9□□□□□ -2.27
SSB-209ENST00000470621 CANT1Q8WVQ1 401 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 TMEM106AQ96A25 262 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 SLC25A21Q9BQT8 299 aaPredicted RBP0.9□□□□□ -2.27
SSB-209ENST00000470621 PRADC1Q9BSG0 188 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 CCDC32Q9BV29 185 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 RTL8AQ9BWD3 113 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 NIT2Q9NQR4 276 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 RASL12Q9NYN1 266 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 BAIAP2Q9UQB8 552 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 SBF1O95248 1867 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 FER1L6Q2WGJ9 1857 aa0.9□□□□□ -2.27
SSB-209ENST00000470621 CAMSAP2Q08AD1 1489 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 RFX7Q2KHR2 1363 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 LOC107984640A0A0U1RRK4 108 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 A0A1B0GX51 115 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 J3KT08 172 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 DEGS1O15121 323 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 NDUFA2O43678 99 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 APOA2P02652 100 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 OR10J4P0C629 311 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 BCL2P10415 239 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 IL9P15248 144 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 SDC4P31431 198 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 SRP14P37108 136 aaKnown RBP0.89□□□□□ -2.27
SSB-209ENST00000470621 FXYD2P54710 66 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 TMBIM6P55061 237 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 ROMO1P60602 79 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 RPS28P62857 69 aaKnown RBP0.89□□□□□ -2.27
SSB-209ENST00000470621 UBE2BP63146 152 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 EIF5AP63241 154 aaKnown RBP0.89□□□□□ -2.27
SSB-209ENST00000470621 ZNF345Q14585 488 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 DEFB115Q30KQ5 88 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 KHDC3LQ587J8 217 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 TRAPPC6BQ86SZ2 158 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 OR8J3Q8NGG0 315 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 OR4D11Q8NGI4 311 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 OR9Q1Q8NGQ5 310 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 OR2T10Q8NGZ9 312 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 AIF1LQ9BQI0 150 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 GINS4Q9BRT9 223 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 TMEM70Q9BUB7 260 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 YIPF3Q9GZM5 350 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 FAM107BQ9H098 131 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 CKLFQ9UBR5 152 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 NAT8BQ9UHF3 227 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 EPDR1Q9UM22 224 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 C22orf24Q9Y442 160 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 LHFPL6Q9Y693 200 aa0.89□□□□□ -2.27
SSB-209ENST00000470621 MYO5AQ9Y4I1 1855 aaKnown RBP0.88□□□□□ -2.27
SSB-209ENST00000470621 IGKV2D-26A0A0A0MRZ7 120 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 TRAV1-1A0A0B4J248 108 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 C9JAW5 83 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 NDUFB3O43676 98 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 TNFSF15O95150 251 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 HTR1AP08908 422 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 TRGC1P0CF51 173 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 COX6A1P12074 109 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 HLA-EP13747 358 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 CKS1BP61024 79 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 PSG9Q00887 426 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 EIF3IQ13347 325 aaKnown RBP0.88□□□□□ -2.27
SSB-209ENST00000470621 SMCO1Q147U7 214 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 ELOBQ15370 118 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 DEFB113Q30KQ7 82 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 BRMS1LQ5PSV4 323 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 ZNF826PQ6ZT77 177 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 AAED1Q7RTV5 226 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 TEX29Q8N6K0 151 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 TMEM229BQ8NBD8 167 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 SLC30A7Q8NEW0 376 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 SKA2Q8WVK7 121 aaPredicted RBP0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms