RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 SKA2Q8WVK7 121 aaPredicted RBP1.63□□□□□ -2.15
SMC4-208ENST00000467468 NAA38Q9BRA0 125 aaKnown RBP1.63□□□□□ -2.15
SMC4-208ENST00000467468 OR2H1Q9GZK4 316 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 CACYBPQ9HB71 228 aaKnown RBP1.63□□□□□ -2.15
SMC4-208ENST00000467468 LAMTOR2Q9Y2Q5 125 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 LY96Q9Y6Y9 160 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 TECPR2O15040 1411 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 H7BYZ3 331 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 HIST1H2BKO60814 126 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 FAM107AO95990 144 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 IFNA4P05014 189 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 HIST1H2BJP06899 126 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 RAB4BP61018 213 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 HBBP68871 147 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 SAMD13Q5VXD3 122 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 ST6GALNAC3Q8NDV1 305 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 OR9Q1Q8NGQ5 310 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 PYDC1Q8WXC3 89 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 ZNF714Q96N38 554 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 CYSTM1Q9H1C7 97 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 C19orf12Q9NSK7 152 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 MED9Q9NWA0 146 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 GINS2Q9Y248 185 aa1.62□□□□□ -2.15
SMC4-208ENST00000467468 ZFHX2Q9C0A1 2572 aaPredicted RBP1.61□□□□□ -2.15
SMC4-208ENST00000467468 ADGBQ8N7X0 1667 aa1.61□□□□□ -2.15
SMC4-208ENST00000467468 OR10J4P0C629 311 aa1.61□□□□□ -2.15
SMC4-208ENST00000467468 RPL35P42766 123 aaKnown RBP1.61□□□□□ -2.15
SMC4-208ENST00000467468 SURF2Q15527 256 aaPredicted RBP1.61□□□□□ -2.15
SMC4-208ENST00000467468 RETNLBQ9BQ08 111 aa1.61□□□□□ -2.15
SMC4-208ENST00000467468 NAT8BQ9UHF3 227 aa1.61□□□□□ -2.15
SMC4-208ENST00000467468 HSPB11Q9Y547 144 aa1.61□□□□□ -2.15
SMC4-208ENST00000467468 TAF1LQ8IZX4 1826 aa1.61□□□□□ -2.15
SMC4-208ENST00000467468 DOCK4Q8N1I0 1966 aa1.6□□□□□ -2.15
SMC4-208ENST00000467468 C17orf112F2Z3M2 114 aa1.6□□□□□ -2.15
SMC4-208ENST00000467468 K7ERJ3 54 aa1.6□□□□□ -2.15
SMC4-208ENST00000467468 S100A11P31949 105 aa1.6□□□□□ -2.15
SMC4-208ENST00000467468 POLR2HP52434 150 aaKnown RBP1.6□□□□□ -2.15
SMC4-208ENST00000467468 EIF3IQ13347 325 aaKnown RBP1.6□□□□□ -2.15
SMC4-208ENST00000467468 C1orf137Q5JT78 98 aa1.6□□□□□ -2.15
SMC4-208ENST00000467468 C15orf53Q8NAA6 179 aa1.6□□□□□ -2.15
SMC4-208ENST00000467468 OR5D16Q8NGK9 328 aa1.6□□□□□ -2.15
SMC4-208ENST00000467468 OR4K15Q8NH41 348 aa1.6□□□□□ -2.15
SMC4-208ENST00000467468 TMEM254Q8TBM7 123 aa1.6□□□□□ -2.15
SMC4-208ENST00000467468 REG4Q9BYZ8 158 aa1.6□□□□□ -2.15
SMC4-208ENST00000467468 MED31Q9Y3C7 131 aa1.6□□□□□ -2.15
SMC4-208ENST00000467468 TRPM1Q7Z4N2 1603 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 TRAPPC8Q9Y2L5 1435 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 B4DSR2 109 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 E7EUB6 86 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 GABARAPH6UMI1 98 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 RER1O15258 196 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 IGLV1-51P01701 117 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 RPL7P18124 248 aaKnown RBP1.59□□□□□ -2.15
SMC4-208ENST00000467468 DSCR4P56555 118 aaPredicted RBP1.59□□□□□ -2.15
SMC4-208ENST00000467468 KLRD1Q13241 179 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 CDK5R1Q15078 307 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 UNQ6190/PRO20217Q6UXQ8 127 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.59□□□□□ -2.15
SMC4-208ENST00000467468 OR4C6Q8NH72 309 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 C4orf3Q8WVX3 66 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 CHCHD1Q96BP2 118 aaKnown RBP1.59□□□□□ -2.15
SMC4-208ENST00000467468 ZC2HC1AQ96GY0 325 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 CCDC115Q96NT0 180 aa1.59□□□□□ -2.15
SMC4-208ENST00000467468 CHCHD2Q9Y6H1 151 aaPredicted RBP1.59□□□□□ -2.15
SMC4-208ENST00000467468 FN1P02751 2386 aaKnown RBP1.59□□□□□ -2.16
SMC4-208ENST00000467468 NUP98P52948 1817 aa1.59□□□□□ -2.16
SMC4-208ENST00000467468 BCL9O00512 1426 aa1.58□□□□□ -2.16
SMC4-208ENST00000467468 ARHGEF11O15085 1522 aa1.58□□□□□ -2.16
SMC4-208ENST00000467468 A0A087WSZ3 146 aa1.58□□□□□ -2.16
SMC4-208ENST00000467468 TCRBV4S1A1TA0A5B7 111 aa1.58□□□□□ -2.16
SMC4-208ENST00000467468 KPNA4O00629 521 aaPredicted RBP1.58□□□□□ -2.16
SMC4-208ENST00000467468 HYPMO75409 117 aa1.58□□□□□ -2.16
SMC4-208ENST00000467468 RAB5CP51148 216 aa1.58□□□□□ -2.16
SMC4-208ENST00000467468 CNBPP62633 177 aaKnown RBP1.58□□□□□ -2.16
SMC4-208ENST00000467468 RPS28P62857 69 aaKnown RBP1.58□□□□□ -2.16
SMC4-208ENST00000467468 HRCT1Q6UXD1 115 aa1.58□□□□□ -2.16
SMC4-208ENST00000467468 CLECL1Q8IZS7 167 aa1.58□□□□□ -2.16
SMC4-208ENST00000467468 Q8N814 137 aa1.58□□□□□ -2.16
SMC4-208ENST00000467468 POP5Q969H6 163 aaKnown RBP1.58□□□□□ -2.16
SMC4-208ENST00000467468 TCEAL2Q9H3H9 227 aaPredicted RBP1.58□□□□□ -2.16
SMC4-208ENST00000467468 COL11A1P12107 1806 aaPredicted RBP1.58□□□□□ -2.16
SMC4-208ENST00000467468 RTL9Q8NET4 1388 aa1.58□□□□□ -2.16
SMC4-208ENST00000467468 NISCHQ9Y2I1 1504 aa1.57□□□□□ -2.16
SMC4-208ENST00000467468 NUP210LQ5VU65 1888 aa1.57□□□□□ -2.16
SMC4-208ENST00000467468 IGKV2D-26A0A0A0MRZ7 120 aa1.57□□□□□ -2.16
SMC4-208ENST00000467468 IGHV1-58A0A0C4DH39 117 aa1.57□□□□□ -2.16
SMC4-208ENST00000467468 RPS3P23396 243 aaKnown RBP eCLIP1.57□□□□□ -2.167e-64■■■■■ 337.8
SMC4-208ENST00000467468 ALX1Q15699 326 aa1.57□□□□□ -2.16
SMC4-208ENST00000467468 C1orf134Q5TEV5 83 aa1.57□□□□□ -2.16
SMC4-208ENST00000467468 C4orf22Q6V702 233 aa1.57□□□□□ -2.16
SMC4-208ENST00000467468 TMEM35BQ8NCS4 154 aa1.57□□□□□ -2.16
SMC4-208ENST00000467468 OR5D14Q8NGL3 314 aa1.57□□□□□ -2.16
SMC4-208ENST00000467468 SPANXA1Q9NS26 97 aa1.57□□□□□ -2.16
SMC4-208ENST00000467468 RASL12Q9NYN1 266 aa1.57□□□□□ -2.16
SMC4-208ENST00000467468 ANAPC1Q9H1A4 1944 aa1.56□□□□□ -2.16
SMC4-208ENST00000467468 TRBV6-8A0A0A6YYG3 113 aa1.56□□□□□ -2.16
SMC4-208ENST00000467468 M0R233 179 aa1.56□□□□□ -2.16
SMC4-208ENST00000467468 FABP2P12104 132 aa1.56□□□□□ -2.16
SMC4-208ENST00000467468 SDC2P34741 201 aa1.56□□□□□ -2.16
SMC4-208ENST00000467468 NDUFA6P56556 154 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms