RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 C20orf166-AS1Q96NR2 134 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 IMMP2LQ96T52 175 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 C20orf27Q9GZN8 174 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 CACYBPQ9HB71 228 aaKnown RBP1.97□□□□□ -2.09
USH2A-203ENST00000463147 TMEM56-RWDD3S4R434 201 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 PTPRFP10586 1907 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 ERCC6L2Q5T890 1561 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 COL4A2P08572 1712 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 FER1L6Q2WGJ9 1857 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 HEATR5AQ86XA9 2040 aa1.96□□□□□ -2.09
USH2A-203ENST00000463147 PLCH1Q4KWH8 1693 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 MALRD1Q5VYJ5 2156 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 LRRC37A3O60309 1634 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 LRP6O75581 1613 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 TRAV9-1A0A075B6T8 112 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 MUC21A0A0G2JKD1 596 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 MUC21A0A140T8X8 626 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 TMEM235A6NFC5 223 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 DPRXA6NFQ7 191 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 GGT3PA6NGU5 568 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 C5orf58C9J3I9 102 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 H3BT86 120 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 DLEU1O43261 78 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 LYRM1O43325 122 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 GGCTO75223 188 aaKnown RBP1.96□□□□□ -2.1
USH2A-203ENST00000463147 MPC2O95563 127 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 IFNA1P01562 189 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 PRM2P04554 102 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 CRHP06850 196 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 HTR1AP08908 422 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 NMBP08949 121 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 METTL15P1P0C7V9 234 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 SMIM10L2AP0DMW4 78 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 SMIM10L2BP0DMW5 78 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 LGALS3P17931 250 aaKnown RBP1.96□□□□□ -2.1
USH2A-203ENST00000463147 S100A11P31949 105 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 SDC2P34741 201 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 RPL22P35268 128 aaKnown RBP1.96□□□□□ -2.1
USH2A-203ENST00000463147 RPL28P46779 137 aaKnown RBP1.96□□□□□ -2.1
USH2A-203ENST00000463147 SRP9P49458 86 aaKnown RBP1.96□□□□□ -2.1
USH2A-203ENST00000463147 EVX1P49640 407 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 FXYD7P58549 80 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 PPP3R1P63098 170 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 EIF5AP63241 154 aaKnown RBP1.96□□□□□ -2.1
USH2A-203ENST00000463147 TAF9Q16594 264 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 FAM74A1Q5RGS3 127 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 AADACL3Q5VUY0 350 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 SMIM20Q8N5G0 67 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 MRPS24Q96EL2 167 aaKnown RBP1.96□□□□□ -2.1
USH2A-203ENST00000463147 DERL1Q9BUN8 251 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 GGACTQ9BVM4 153 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 PCBD2Q9H0N5 130 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 TMEM138Q9NPI0 162 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 SMCO4Q9NRQ5 59 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 SS18L2Q9UHA2 77 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 GNG8Q9UK08 70 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 V9GYH0 126 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 RGPD1P0DJD0 1748 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 TIAM2Q8IVF5 1701 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 CDK5RAP2Q96SN8 1893 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 TANC1Q9C0D5 1861 aa1.96□□□□□ -2.1
USH2A-203ENST00000463147 RGPD8O14715 1765 aaPredicted RBP1.95□□□□□ -2.1
USH2A-203ENST00000463147 RGPD5Q99666 1765 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 RIMBP3CA6NJZ7 1639 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 RIMBP3BA6NNM3 1639 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 RIMBP3Q9UFD9 1639 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 MEIKINA0A087WXM9 373 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 TRGV5A0A0B4J1U4 118 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 A0A1B0GV72 72 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 TMEM218A2RU14 115 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 TRAPPC2LH3BP13 241 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 BUB1B-PAK6H3BSN5 160 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 M0R143 59 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 CFDP00746 253 aaPredicted RBP1.95□□□□□ -2.1
USH2A-203ENST00000463147 IFNA17P01571 189 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 MT-ND4LP03901 98 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 LGALS1P09382 135 aaKnown RBP1.95□□□□□ -2.1
USH2A-203ENST00000463147 UBBP0CG47 229 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 HIST1H1BP16401 226 aaKnown RBP1.95□□□□□ -2.1
USH2A-203ENST00000463147 SDC4P31431 198 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 CRYBA4P53673 196 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 TCTAP57738 103 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 RHOBP62745 196 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 UBA52P62987 128 aaKnown RBP1.95□□□□□ -2.1
USH2A-203ENST00000463147 RHEBQ15382 184 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 SCIMPQ6UWF3 145 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 BRD3OSQ6XYD6 125 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 GOLT1AQ6ZVE7 132 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 ANGPTL5Q86XS5 388 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 PHF13Q86YI8 300 aaPredicted RBP1.95□□□□□ -2.1
USH2A-203ENST00000463147 LRRC18Q8N456 261 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 Q8NDZ9 215 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 OR52R1Q8NGF1 315 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 OR10K1Q8NGX5 313 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 TERB2Q8NHR7 220 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 SLC25A40Q8TBP6 338 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 H1FXQ92522 213 aaKnown RBP1.95□□□□□ -2.1
USH2A-203ENST00000463147 TOMM6Q96B49 74 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 RNF122Q9H9V4 155 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 MED29Q9NX70 200 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms