RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 OR5AC2Q9NZP5 309 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 LY96Q9Y6Y9 160 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 NCKAP5O14513 1909 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 MYH3P11055 1940 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 VWDEQ8N2E2 1590 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 ADGBQ8N7X0 1667 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 STRCP1A6NGW2 1772 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 TRAPPC8Q9Y2L5 1435 aa1.66□□□□□ -2.14
GPNMB-205ENST00000463011 TRAV12-1A0A0B4J245 112 aa1.66□□□□□ -2.14
GPNMB-205ENST00000463011 TRBV6-5A0A0K0K1A5 114 aa1.66□□□□□ -2.14
GPNMB-205ENST00000463011 KPNA4O00629 521 aaPredicted RBP1.66□□□□□ -2.14
GPNMB-205ENST00000463011 DHFRP00374 187 aa1.66□□□□□ -2.14
GPNMB-205ENST00000463011 OR10J4P0C629 311 aa1.66□□□□□ -2.14
GPNMB-205ENST00000463011 ARPC4P59998 168 aa1.66□□□□□ -2.14
GPNMB-205ENST00000463011 ROMO1P60602 79 aa1.66□□□□□ -2.14
GPNMB-205ENST00000463011 OR8B8Q15620 311 aa1.66□□□□□ -2.14
GPNMB-205ENST00000463011 KRTAP13-4Q3LI77 160 aa1.66□□□□□ -2.14
GPNMB-205ENST00000463011 TEX29Q8N6K0 151 aa1.66□□□□□ -2.14
GPNMB-205ENST00000463011 MYH2Q9UKX2 1941 aa1.66□□□□□ -2.14
GPNMB-205ENST00000463011 ARHGEF11O15085 1522 aa1.66□□□□□ -2.14
GPNMB-205ENST00000463011 ARHGEF10O15013 1369 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 TRGV2A0A075B6R0 118 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 IGKV2D-26A0A0A0MRZ7 120 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 M0R233 179 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 DEGS1O15121 323 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 NDUFA6P56556 154 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 PCOTHQ58A44 107 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 C10orf55Q5SWW7 151 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 C4orf22Q6V702 233 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 LINC00305Q7Z4B0 112 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 CLECL1Q8IZS7 167 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 OR5D14Q8NGL3 314 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 TMEM254Q8TBM7 123 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 TAF9BQ9HBM6 251 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 GSKIPQ9P0R6 139 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 JPT1Q9UK76 154 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 OBSL1O75147 1896 aa1.65□□□□□ -2.15
GPNMB-205ENST00000463011 TRAV36DV7A0A075B6V5 113 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 A0A087WX48 190 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 IGHV1-58A0A0C4DH39 117 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 LOC107984640A0A0U1RRK4 108 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 C17orf112F2Z3M2 114 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 F8W036 122 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 IGLV1-51P01701 117 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 RAB5CP51148 216 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 KRTAP12-1P59990 96 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 PDE6HQ13956 83 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 VMA21Q3ZAQ7 101 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 C1orf134Q5TEV5 83 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 KRTAP13-1Q8IUC0 172 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 Q8N814 137 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 TMEM229BQ8NBD8 167 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 MAFIPQ8WZ33 124 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 LXNQ9BS40 222 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 SPANXA1Q9NS26 97 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 PTPRBP23467 1997 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 SBF1O95248 1867 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 NUP210LQ5VU65 1888 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 HEATR5AQ86XA9 2040 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 PIK3C2AO00443 1686 aa1.64□□□□□ -2.15
GPNMB-205ENST00000463011 ARAP1Q96P48 1450 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 PLXNA3P51805 1871 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 TRPM1Q7Z4N2 1603 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 RTL9Q8NET4 1388 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 UBR2Q8IWV8 1755 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 CD2P06729 351 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 RPS28P62857 69 aaKnown RBP1.63□□□□□ -2.15
GPNMB-205ENST00000463011 CDK5R1Q15078 307 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 CCDC153Q494R4 210 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 FAM216BQ8N7L0 139 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 OR5H6Q8NGV6 325 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 LZICQ8WZA0 190 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 REG4Q9BYZ8 158 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 NIT2Q9NQR4 276 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 RASL12Q9NYN1 266 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 COL5A1P20908 1838 aaPredicted RBP1.63□□□□□ -2.15
GPNMB-205ENST00000463011 FRMPD1Q5SYB0 1578 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 DOCK4Q8N1I0 1966 aa1.63□□□□□ -2.15
GPNMB-205ENST00000463011 N4BP2Q86UW6 1770 aaPredicted RBP1.62□□□□□ -2.15
GPNMB-205ENST00000463011 MYH7BA7E2Y1 1941 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 NISCHQ9Y2I1 1504 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 NUP98P52948 1817 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 TAF1LQ8IZX4 1826 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 TRAV13-1A0A0B4J241 112 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 A0A1B0GX51 115 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 TCRBV4S1A1TA0A5B7 111 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 OR2T8A6NH00 312 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 SDC4P31431 198 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 CDK6Q00534 326 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 OR8I2Q8N0Y5 310 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 Q8N2B8 174 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 C15orf53Q8NAA6 179 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 OR4B1Q8NGF8 309 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 BRK1Q8WUW1 75 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 RAB37Q96AX2 223 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 MUCL1Q96DR8 90 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 PRELID3AQ96N28 172 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 GGACTQ9BVM4 153 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 CBLN4Q9NTU7 201 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 OVOS2A0A0G2JMS6 1433 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms