RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 CD33P20138 364 aa8.65□□□□□ -1.02
RFX3-211ENST00000458034 BTF3P20290 206 aaKnown RBP8.65□□□□□ -1.02
RFX3-211ENST00000458034 CSN1S1P47710 185 aa8.65□□□□□ -1.02
RFX3-211ENST00000458034 PRB3Q04118 309 aaPredicted RBP8.65□□□□□ -1.02
RFX3-211ENST00000458034 C11orf71Q6IPW1 123 aa8.65□□□□□ -1.02
RFX3-211ENST00000458034 ARL6IP6Q8N6S5 226 aa8.65□□□□□ -1.02
RFX3-211ENST00000458034 OR2D3Q8NGH3 330 aa8.65□□□□□ -1.02
RFX3-211ENST00000458034 ARPC1AQ92747 370 aa8.65□□□□□ -1.02
RFX3-211ENST00000458034 SGK494Q96LW2 274 aa8.65□□□□□ -1.02
RFX3-211ENST00000458034 AAMDCQ9H7C9 122 aa8.65□□□□□ -1.02
RFX3-211ENST00000458034 HILPDAQ9Y5L2 63 aa8.65□□□□□ -1.02
RFX3-211ENST00000458034 ACACAQ13085 2346 aa8.65□□□□□ -1.03
RFX3-211ENST00000458034 PCNX1Q96RV3 2341 aa8.65□□□□□ -1.03
RFX3-211ENST00000458034 PKDREJQ9NTG1 2253 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 H3BTX0 84 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 IL4P05112 153 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 IGLC2P0DOY2 106 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 ADORA2A-AS1P86434 159 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 PSG9Q00887 426 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 Q56UQ5 140 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 C16orf54Q6UWD8 224 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 ZNF562Q6V9R5 426 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 EXOC3-AS1Q8N2X6 119 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 FAM19A2Q8N3H0 131 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 TTC9CQ8N5M4 171 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 ZNF491Q8N8L2 437 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 NDFIP1Q9BT67 221 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 PSG8Q9UQ74 426 aa8.64□□□□□ -1.03
RFX3-211ENST00000458034 RP1L1Q8IWN7 2480 aaPredicted RBP8.63□□□□□ -1.03
RFX3-211ENST00000458034 IGLV11-55A0A075B6I3 123 aa8.63□□□□□ -1.03
RFX3-211ENST00000458034 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.63□□□□□ -1.03
RFX3-211ENST00000458034 OR5AL1P0C617 328 aa8.63□□□□□ -1.03
RFX3-211ENST00000458034 CT45A10P0DMU9 189 aa8.63□□□□□ -1.03
RFX3-211ENST00000458034 GRNP28799 593 aaKnown RBP8.63□□□□□ -1.03
RFX3-211ENST00000458034 CTRLP40313 264 aa8.63□□□□□ -1.03
RFX3-211ENST00000458034 FOXA3P55318 350 aaPredicted RBP8.63□□□□□ -1.03
RFX3-211ENST00000458034 PSG3Q16557 428 aa8.63□□□□□ -1.03
RFX3-211ENST00000458034 SIGLEC15Q6ZMC9 328 aa8.63□□□□□ -1.03
RFX3-211ENST00000458034 LINC00322Q6ZN03 302 aaPredicted RBP8.63□□□□□ -1.03
RFX3-211ENST00000458034 LHFPL4Q7Z7J7 247 aa8.63□□□□□ -1.03
RFX3-211ENST00000458034 CIARTQ8N365 385 aaPredicted RBP8.63□□□□□ -1.03
RFX3-211ENST00000458034 GATD1Q8NB37 220 aa8.63□□□□□ -1.03
RFX3-211ENST00000458034 GTSF1Q8WW33 167 aa8.63□□□□□ -1.03
RFX3-211ENST00000458034 TXN2Q99757 166 aa8.63□□□□□ -1.03
RFX3-211ENST00000458034 SSBP4Q9BWG4 385 aaPredicted RBP8.63□□□□□ -1.03
RFX3-211ENST00000458034 C1RLQ9NZP8 487 aa8.63□□□□□ -1.03
RFX3-211ENST00000458034 RNF114Q9Y508 228 aa8.63□□□□□ -1.03
RFX3-211ENST00000458034 CELSR3Q9NYQ7 3312 aa8.62□□□□□ -1.03
RFX3-211ENST00000458034 LOC102724200A0A096LPH7 203 aaPredicted RBP8.62□□□□□ -1.03
RFX3-211ENST00000458034 A0A1B0GUT8 65 aa8.62□□□□□ -1.03
RFX3-211ENST00000458034 IGLV2-11P01706 119 aa8.62□□□□□ -1.03
RFX3-211ENST00000458034 RPL7P18124 248 aaKnown RBP8.62□□□□□ -1.03
RFX3-211ENST00000458034 FCGR2BP31994 310 aaPredicted RBP8.62□□□□□ -1.03
RFX3-211ENST00000458034 HNRNPA3P51991 378 aaKnown RBP8.62□□□□□ -1.03
RFX3-211ENST00000458034 KLRD1Q13241 179 aa8.62□□□□□ -1.03
RFX3-211ENST00000458034 EBI3Q14213 229 aa8.62□□□□□ -1.03
RFX3-211ENST00000458034 TDRG1Q3Y452 100 aa8.62□□□□□ -1.03
RFX3-211ENST00000458034 VMO1Q7Z5L0 202 aa8.62□□□□□ -1.03
RFX3-211ENST00000458034 DTX2Q86UW9 622 aa8.62□□□□□ -1.03
RFX3-211ENST00000458034 ZNF414Q96IQ9 312 aa8.62□□□□□ -1.03
RFX3-211ENST00000458034 C21orf62Q9NYP8 219 aa8.62□□□□□ -1.03
RFX3-211ENST00000458034 ROS1P08922 2347 aa8.62□□□□□ -1.03
RFX3-211ENST00000458034 CEP250Q9BV73 2442 aa8.61□□□□□ -1.03
RFX3-211ENST00000458034 TRAV9-2A0A087WT02 112 aa8.61□□□□□ -1.03
RFX3-211ENST00000458034 VWC2LB2RUY7 222 aa8.61□□□□□ -1.03
RFX3-211ENST00000458034 MRPS12O15235 138 aaKnown RBP8.61□□□□□ -1.03
RFX3-211ENST00000458034 IGLC3P0DOY3 106 aa8.61□□□□□ -1.03
RFX3-211ENST00000458034 TMEM11P17152 192 aa8.61□□□□□ -1.03
RFX3-211ENST00000458034 COL5A1-AS1Q5SY13 56 aa8.61□□□□□ -1.03
RFX3-211ENST00000458034 LDLRAD2Q5SZI1 272 aa8.61□□□□□ -1.03
RFX3-211ENST00000458034 ASPHD1Q5U4P2 390 aa8.61□□□□□ -1.03
RFX3-211ENST00000458034 Q8N6K4 173 aa8.61□□□□□ -1.03
RFX3-211ENST00000458034 TMEM70Q9BUB7 260 aa8.61□□□□□ -1.03
RFX3-211ENST00000458034 TRAV8-1A0A0A6YYK1 113 aa8.6□□□□□ -1.03
RFX3-211ENST00000458034 A6NNC1 897 aa8.6□□□□□ -1.03
RFX3-211ENST00000458034 NCBP2LA6PVI3 153 aaKnown RBP8.6□□□□□ -1.03
RFX3-211ENST00000458034 TOX4O94842 621 aa8.6□□□□□ -1.03
RFX3-211ENST00000458034 FAM106CPP0CH98 169 aa8.6□□□□□ -1.03
RFX3-211ENST00000458034 RAB9AP51151 201 aa8.6□□□□□ -1.03
RFX3-211ENST00000458034 RPS20P60866 119 aaKnown RBP8.6□□□□□ -1.03
RFX3-211ENST00000458034 SAPCD1Q5SSQ6 148 aa8.6□□□□□ -1.03
RFX3-211ENST00000458034 Q6ZN92 141 aa8.6□□□□□ -1.03
RFX3-211ENST00000458034 ZC2HC1AQ96GY0 325 aa8.6□□□□□ -1.03
RFX3-211ENST00000458034 FANCD2OSQ96PS1 177 aa8.6□□□□□ -1.03
RFX3-211ENST00000458034 RABAC1Q9UI14 185 aa8.6□□□□□ -1.03
RFX3-211ENST00000458034 HSPB8Q9UJY1 196 aa8.6□□□□□ -1.03
RFX3-211ENST00000458034 RAXQ9Y2V3 346 aa8.6□□□□□ -1.03
RFX3-211ENST00000458034 APC2O95996 2303 aa8.59□□□□□ -1.03
RFX3-211ENST00000458034 SH2D7A6NKC9 451 aaPredicted RBP8.59□□□□□ -1.03
RFX3-211ENST00000458034 LEPROTL1O95214 131 aa8.59□□□□□ -1.03
RFX3-211ENST00000458034 APOHP02749 345 aaPredicted RBP8.59□□□□□ -1.03
RFX3-211ENST00000458034 LINC00614P0C842 121 aa8.59□□□□□ -1.03
RFX3-211ENST00000458034 EBLN2Q6P2I7 272 aa8.59□□□□□ -1.03
RFX3-211ENST00000458034 TMEM191AQ9H0A3 160 aa8.59□□□□□ -1.03
RFX3-211ENST00000458034 PRRC2CQ9Y520 2896 aaKnown RBP8.59□□□□□ -1.04
RFX3-211ENST00000458034 MUC3AQ02505 3323 aa8.59□□□□□ -1.04
RFX3-211ENST00000458034 A0A1W2PRD5 423 aa8.58□□□□□ -1.04
RFX3-211ENST00000458034 A0A1W2PRF3 423 aa8.58□□□□□ -1.04
RFX3-211ENST00000458034 A0A1W2PRM7 423 aa8.58□□□□□ -1.04
RFX3-211ENST00000458034 TMEM189A5PLL7 270 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms