RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 FOXI3A8MTJ6 420 aaPredicted RBP6.24□□□□□ -1.41
SYNPO2-202ENST00000429713 IGKV3-11P04433 115 aa6.24□□□□□ -1.41
SYNPO2-202ENST00000429713 CXCL5P42830 114 aa6.24□□□□□ -1.41
SYNPO2-202ENST00000429713 C5orf24Q7Z6I8 188 aa6.24□□□□□ -1.41
SYNPO2-202ENST00000429713 DTX2Q86UW9 622 aa6.24□□□□□ -1.41
SYNPO2-202ENST00000429713 RBP4P02753 201 aa6.24□□□□□ -1.41
SYNPO2-202ENST00000429713 TMEM42Q69YG0 159 aa6.24□□□□□ -1.41
SYNPO2-202ENST00000429713 CARD19Q96LW7 228 aa6.24□□□□□ -1.41
SYNPO2-202ENST00000429713 NDUFA7O95182 113 aa6.24□□□□□ -1.41
SYNPO2-202ENST00000429713 NXPH1P58417 271 aa6.24□□□□□ -1.41
SYNPO2-202ENST00000429713 C2orf82Q6UX34 121 aa6.24□□□□□ -1.41
SYNPO2-202ENST00000429713 ZNF841Q6ZN19 808 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 PRADC1Q9BSG0 188 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 SCO2A0A1W2PP80 73 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 HAX1O00165 279 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 MGST3O14880 152 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 C2orf83Q53S99 150 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 ZNF501Q96CX3 271 aaPredicted RBP6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 SRSF8Q9BRL6 282 aaKnown RBP6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 PRR33A8MZF0 331 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 LMO1P25800 156 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 EFNB3Q15768 340 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 Q6P435 159 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 PCSK4Q6UW60 755 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 SARAFQ96BY9 339 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 TM4SF5O14894 197 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 PILRBQ9UKJ0 227 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 IGLV3-32A0A0A0MS00 114 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 FOXA2Q9Y261 457 aaPredicted RBP6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 COL4A6Q14031 1691 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 GTSF1Q8WW33 167 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 LIME1Q9H400 295 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 TRAV8-6A0A0B4J262 113 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 PRR32B1ATL7 298 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 HERV-K104P63124 156 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 V9GYV3 84 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 TEX45Q8NA69 505 aa6.23□□□□□ -1.41
SYNPO2-202ENST00000429713 JMJD1CQ15652 2540 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 MAGEA5P43359 124 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 PRO1854Q9UHT4 67 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 CSRP1P21291 193 aaKnown RBP6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 ZNF488Q96MN9 340 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 MUC4Q99102 2169 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 IGHV1-45A0A0A0MS14 117 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 C15orf61A6NNL5 157 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 KLRB1Q12918 225 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 IGFBPL1Q8WX77 278 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 PGLYRP4Q96LB8 373 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 DUX5Q96PT3 197 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 FOXC2Q99958 501 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 IDI2-AS1Q9NZ38 188 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 SPTBN4Q9H254 2564 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 SLC50A1Q9BRV3 221 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 E9PLD3 99 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 TGFAP01135 160 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 TRAV25A0A0B4J276 109 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 LYPD3O95274 346 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 TNXAQ16473 311 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 KIAA1644Q3SXP7 199 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 PVRIGQ6DKI7 326 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 TMEM141Q96I45 108 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 IGKV1D-43A0A0B4J1Z2 117 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 SHISA7A6NL88 538 aa6.22□□□□□ -1.41
SYNPO2-202ENST00000429713 TNRC6BQ9UPQ9 1833 aaKnown RBP6.21□□□□□ -1.41
SYNPO2-202ENST00000429713 A0A0A6YYD4 124 aa6.21□□□□□ -1.41
SYNPO2-202ENST00000429713 ZG16O60844 167 aa6.21□□□□□ -1.41
SYNPO2-202ENST00000429713 LEPP41159 167 aa6.21□□□□□ -1.41
SYNPO2-202ENST00000429713 LCN12Q6JVE5 192 aa6.21□□□□□ -1.41
SYNPO2-202ENST00000429713 LRRK2Q5S007 2527 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 NAV2Q8IVL1 2488 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 METRNQ9UJH8 293 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 A0A0J9YW62 118 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 UFSP1Q6NVU6 142 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 TRGV9Q99603 122 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 SPANXN1Q5VSR9 72 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 ZNF815PA8K554 130 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 F8VRH5 84 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 SYNGR3O43761 229 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 TMEM78Q5T7P6 136 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 FLYWCH2Q96CP2 140 aaKnown RBP6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 ZFYVE26Q68DK2 2539 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 LOC389332A0A1B0GUA5 103 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 TCRBV4S1A1TA0A5B7 111 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 LYZP61626 148 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 PRDM6Q9NQX0 595 aa6.21□□□□□ -1.42
SYNPO2-202ENST00000429713 UPK2O00526 184 aa6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 MDP1Q86V88 176 aa6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 HILPDAQ9Y5L2 63 aa6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 TGFBR3LH3BV60 316 aa6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 DUSP14O95147 198 aaKnown RBP6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 RHODO00212 210 aa6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 ARTNQ5T4W7 220 aa6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 NUP37Q8NFH4 326 aa6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 IQCF6A8MYZ5 107 aa6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 NDUFB3O43676 98 aa6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 PDE6GP18545 87 aa6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 LINC00643Q86TS7 51 aa6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 DLL3Q9NYJ7 618 aa6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 CRYGSP22914 178 aa6.2□□□□□ -1.42
SYNPO2-202ENST00000429713 WFDC8Q8IUA0 241 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms