RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 FAM231BA6NCW3 169 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 IZUMO1RA6ND01 250 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 IFITM10A6NMD0 228 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 SLC17A3O00476 420 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 GATA3P23771 443 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 CD24P25063 80 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 OR5I1Q13606 314 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 CLEC12BQ2HXU8 276 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 DEFB113Q30KQ7 82 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 Q56UQ5 140 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 C19orf35Q6ZS72 473 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 WIPF2Q8TF74 440 aaPredicted RBP10.67□□□□□ -0.7
LIMS1-205ENST00000410093 MBD6Q96DN6 1003 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 MLST8Q9BVC4 326 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 MEGF9Q9H1U4 602 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 SOX21Q9Y651 276 aaPredicted RBP10.67□□□□□ -0.7
LIMS1-205ENST00000410093 TRBV19A0A075B6N1 114 aa10.66□□□□□ -0.7
LIMS1-205ENST00000410093 IGHV1-69DA0A0B4J2H0 117 aa10.66□□□□□ -0.7
LIMS1-205ENST00000410093 LTAP01374 205 aa10.66□□□□□ -0.7
LIMS1-205ENST00000410093 IGHV1-69P01742 117 aa10.66□□□□□ -0.7
LIMS1-205ENST00000410093 HLA-DQA1P01909 254 aa10.66□□□□□ -0.7
LIMS1-205ENST00000410093 IL4P05112 153 aa10.66□□□□□ -0.7
LIMS1-205ENST00000410093 IGLC2P0DOY2 106 aa10.66□□□□□ -0.7
LIMS1-205ENST00000410093 ATP5L2Q7Z4Y8 100 aa10.66□□□□□ -0.7
LIMS1-205ENST00000410093 HIST1H2BLQ99880 126 aa10.66□□□□□ -0.7
LIMS1-205ENST00000410093 FAM103A1Q9BTL3 118 aaKnown RBP10.66□□□□□ -0.7
LIMS1-205ENST00000410093 RNASE7Q9H1E1 156 aaKnown RBP10.66□□□□□ -0.7
LIMS1-205ENST00000410093 NIT2Q9NQR4 276 aa10.66□□□□□ -0.7
LIMS1-205ENST00000410093 NAT8BQ9UHF3 227 aa10.66□□□□□ -0.7
LIMS1-205ENST00000410093 AKAP6Q13023 2319 aa10.66□□□□□ -0.7
LIMS1-205ENST00000410093 ZNF253O75346 499 aa10.65□□□□□ -0.7
LIMS1-205ENST00000410093 AMY1AP04745 511 aa10.65□□□□□ -0.7
LIMS1-205ENST00000410093 EGR2P11161 476 aaPredicted RBP10.65□□□□□ -0.7
LIMS1-205ENST00000410093 RPL7P18124 248 aaKnown RBP10.65□□□□□ -0.7
LIMS1-205ENST00000410093 CRIP2P52943 208 aaPredicted RBP10.65□□□□□ -0.7
LIMS1-205ENST00000410093 PSG9Q00887 426 aa10.65□□□□□ -0.7
LIMS1-205ENST00000410093 USF2Q15853 346 aaPredicted RBP10.65□□□□□ -0.7
LIMS1-205ENST00000410093 OR8I2Q8N0Y5 310 aa10.65□□□□□ -0.7
LIMS1-205ENST00000410093 TMEM75Q8N9X5 138 aa10.65□□□□□ -0.7
LIMS1-205ENST00000410093 OR10D4PQ8NGN7 298 aa10.65□□□□□ -0.7
LIMS1-205ENST00000410093 TSKUQ8WUA8 353 aa10.65□□□□□ -0.7
LIMS1-205ENST00000410093 PACRGQ96M98 296 aaPredicted RBP10.65□□□□□ -0.7
LIMS1-205ENST00000410093 GFRA4Q9GZZ7 299 aa10.65□□□□□ -0.7
LIMS1-205ENST00000410093 GSX1Q9H4S2 264 aaPredicted RBP10.65□□□□□ -0.7
LIMS1-205ENST00000410093 SERTAD4Q9NUC0 356 aa10.65□□□□□ -0.7
LIMS1-205ENST00000410093 BEX4Q9NWD9 120 aaPredicted RBP10.65□□□□□ -0.7
LIMS1-205ENST00000410093 ZNF586Q9NXT0 402 aa10.65□□□□□ -0.7
LIMS1-205ENST00000410093 FBXL7Q9UJT9 491 aa10.65□□□□□ -0.7
LIMS1-205ENST00000410093 ZFP30Q9Y2G7 519 aa10.65□□□□□ -0.7
LIMS1-205ENST00000410093 MOB4Q9Y3A3 225 aa10.65□□□□□ -0.7
LIMS1-205ENST00000410093 A8MWL6 223 aa10.64□□□□□ -0.71
LIMS1-205ENST00000410093 BMPR1BO00238 502 aa10.64□□□□□ -0.71
LIMS1-205ENST00000410093 BRI3O95415 125 aa10.64□□□□□ -0.71
LIMS1-205ENST00000410093 FABP4P15090 132 aa10.64□□□□□ -0.71
LIMS1-205ENST00000410093 ATP5J2P56134 94 aa10.64□□□□□ -0.71
LIMS1-205ENST00000410093 NDPQ00604 133 aa10.64□□□□□ -0.71
LIMS1-205ENST00000410093 Q0VG73 95 aa10.64□□□□□ -0.71
LIMS1-205ENST00000410093 OR4B1Q8NGF8 309 aa10.64□□□□□ -0.71
LIMS1-205ENST00000410093 MRPL18Q9H0U6 180 aaKnown RBP10.64□□□□□ -0.71
LIMS1-205ENST00000410093 C7orf69Q9H7B7 122 aa10.64□□□□□ -0.71
LIMS1-205ENST00000410093 AAMDCQ9H7C9 122 aa10.64□□□□□ -0.71
LIMS1-205ENST00000410093 TRBV7-1A0A0A6YYK4 115 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 F8W735 103 aaPredicted RBP10.63□□□□□ -0.71
LIMS1-205ENST00000410093 M0QZK8 103 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 ESDP10768 282 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 SLC25A16P16260 332 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 PAFAH1B2P68402 229 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 UNQ5815/PRO19632Q6UWF5 114 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 C5orf56Q8N8D9 126 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 NUDT10Q8NFP7 164 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 OR5R1Q8NH85 324 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 DAZAP1Q96EP5 407 aaKnown RBP10.63□□□□□ -0.71
LIMS1-205ENST00000410093 NUDT11Q96G61 164 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 TMUB1Q9BVT8 246 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 ZNF331Q9NQX6 463 aaPredicted RBP10.63□□□□□ -0.71
LIMS1-205ENST00000410093 RABAC1Q9UI14 185 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 F8P00451 2351 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 SNURFLB1AK76 121 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 MRPS12O15235 138 aaKnown RBP10.63□□□□□ -0.71
LIMS1-205ENST00000410093 CSN1S1P47710 185 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 OR10J3Q5JRS4 329 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 GFI1BQ5VTD9 330 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 PRSS22Q9GZN4 317 aa10.63□□□□□ -0.71
LIMS1-205ENST00000410093 TRAV20A0A0B4J274 112 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 FAM223BA6NKX1 122 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 OR2J3O76001 311 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 AMBPP02760 352 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 CTSGP08311 255 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 CRISP2P16562 243 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 ADMP35318 185 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 IER3P46695 156 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 GNG5P63218 68 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
LIMS1-205ENST00000410093 PYY3Q5JQD4 70 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 KLF17Q5JT82 389 aaPredicted RBP10.62□□□□□ -0.71
LIMS1-205ENST00000410093 FAM120AOSQ5T036 256 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 LEMD1Q68G75 181 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 SIGLEC15Q6ZMC9 328 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 FAM223AQ8IWN6 122 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms