RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 NDPQ00604 133 aa13.2□□□□□ -0.3
PCDHA12-201ENST00000398631 SRSF8Q9BRL6 282 aaKnown RBP13.2□□□□□ -0.3
PCDHA12-201ENST00000398631 RBMY1BA6NDE4 496 aaKnown RBP13.2□□□□□ -0.3
PCDHA12-201ENST00000398631 RBMY1EA6NEQ0 496 aaKnown RBP13.2□□□□□ -0.3
PCDHA12-201ENST00000398631 RBMY1DP0C7P1 496 aaKnown RBP13.2□□□□□ -0.3
PCDHA12-201ENST00000398631 RBMY1A1P0DJD3 496 aaKnown RBP13.2□□□□□ -0.3
PCDHA12-201ENST00000398631 RBMY1CP0DJD4 496 aa13.2□□□□□ -0.3
PCDHA12-201ENST00000398631 LCNL1Q6ZST4 164 aa13.2□□□□□ -0.3
PCDHA12-201ENST00000398631 LINC00469Q8N7U9 141 aa13.2□□□□□ -0.3
PCDHA12-201ENST00000398631 A0A1B0GWB2 263 aa13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 CEACAM8P31997 349 aaPredicted RBP13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 NTF4P34130 210 aa13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 LINC00477Q96M19 166 aa13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 DPM2O94777 84 aa13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 PLXNA3P51805 1871 aa13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 LINC00205P59089 165 aa13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 RCHY1Q96PM5 261 aa13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 RNF223E7ERA6 249 aa13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 RNASE2P10153 161 aaKnown RBP13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 EVI2AP22794 236 aa13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 TRAV9-2A0A087WT02 112 aa13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 C15orf62A8K5M9 175 aa13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 IGKV1-16P04430 117 aa13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 PCNX2A6NKB5 2137 aa13.19□□□□□ -0.3
PCDHA12-201ENST00000398631 PRB4P10163 310 aaPredicted RBP13.18□□□□□ -0.3
PCDHA12-201ENST00000398631 PRADC1Q9BSG0 188 aa13.18□□□□□ -0.3
PCDHA12-201ENST00000398631 A0A087WX48 190 aa13.18□□□□□ -0.3
PCDHA12-201ENST00000398631 PROK2Q9HC23 129 aa13.18□□□□□ -0.3
PCDHA12-201ENST00000398631 RNF114Q9Y508 228 aa13.18□□□□□ -0.3
PCDHA12-201ENST00000398631 UBE2E1P51965 193 aa13.18□□□□□ -0.3
PCDHA12-201ENST00000398631 BEND2Q8NDZ0 799 aa13.18□□□□□ -0.3
PCDHA12-201ENST00000398631 RHPN1-AS1Q9BWJ2 59 aa13.18□□□□□ -0.3
PCDHA12-201ENST00000398631 FCN3O75636 299 aa13.18□□□□□ -0.3
PCDHA12-201ENST00000398631 GATA4P43694 442 aa13.18□□□□□ -0.3
PCDHA12-201ENST00000398631 LYPD1Q8N2G4 141 aa13.18□□□□□ -0.3
PCDHA12-201ENST00000398631 RFNGQ9Y644 331 aa13.18□□□□□ -0.3
PCDHA12-201ENST00000398631 ZSWIM8A7E2V4 1837 aa13.18□□□□□ -0.3
PCDHA12-201ENST00000398631 RNF182Q8N6D2 247 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 C1QTNF4Q9BXJ3 329 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 A6NNC1 897 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 ZNF562Q6V9R5 426 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 OR9G4Q8NGQ1 327 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 RNF166Q96A37 237 aaPredicted RBP13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 FANCMQ8IYD8 2048 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 COLCA2A8K830 154 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 TNFSF13O75888 250 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 GZMBP10144 247 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 GBF1Q92538 1859 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 ADARB2-AS1A8MUL3 147 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 TOMM40O96008 361 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 LMO1P25800 156 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 ACTL10Q5JWF8 245 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 Q8TCH9 128 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 IFI27L1Q96BM0 104 aa13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 CHCHD1Q96BP2 118 aaKnown RBP13.17□□□□□ -0.3
PCDHA12-201ENST00000398631 ZNF415Q09FC8 603 aa13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 LINC01551Q86U37 167 aa13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 RPL36AP83881 106 aaKnown RBP13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 LCN12Q6JVE5 192 aa13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 RPL36ALQ969Q0 106 aaKnown RBP13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 HIST1H2BLQ99880 126 aa13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 FNDC10F2Z333 226 aa13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 GHRHP01286 108 aa13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 Q5PR19 223 aa13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 HS3ST6Q96QI5 342 aa13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 DAZ1Q9NQZ3 744 aaKnown RBP13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 A0A0G2JRQ6 117 aa13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 NBL1P41271 181 aa13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 Q6ZRM9 215 aa13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 VGLL1Q99990 258 aa13.16□□□□□ -0.3
PCDHA12-201ENST00000398631 TRGV1A0A0A0MS02 117 aa13.15□□□□□ -0.3
PCDHA12-201ENST00000398631 TRAV12-3A0A0B4J271 114 aa13.15□□□□□ -0.3
PCDHA12-201ENST00000398631 OVOL3O00110 214 aa13.15□□□□□ -0.3
PCDHA12-201ENST00000398631 FOXL1Q12952 345 aa13.15□□□□□ -0.3
PCDHA12-201ENST00000398631 TSPAN13O95857 204 aa13.15□□□□□ -0.3
PCDHA12-201ENST00000398631 HIST3H2BBQ8N257 126 aa13.15□□□□□ -0.3
PCDHA12-201ENST00000398631 CHTOPQ9Y3Y2 248 aaKnown RBP13.15□□□□□ -0.3
PCDHA12-201ENST00000398631 ZNF876PQ49A33 203 aa13.15□□□□□ -0.31
PCDHA12-201ENST00000398631 Q8TAT8 98 aa13.15□□□□□ -0.31
PCDHA12-201ENST00000398631 A0A1W2PPI3 338 aa13.14□□□□□ -0.31
PCDHA12-201ENST00000398631 PLNP26678 52 aa13.14□□□□□ -0.31
PCDHA12-201ENST00000398631 C10orf126Q8N4M7 172 aa13.14□□□□□ -0.31
PCDHA12-201ENST00000398631 GTF3C1Q12789 2109 aa13.14□□□□□ -0.31
PCDHA12-201ENST00000398631 LYZL1Q6UWQ5 148 aa13.14□□□□□ -0.31
PCDHA12-201ENST00000398631 RPL35AP18077 110 aaKnown RBP13.14□□□□□ -0.31
PCDHA12-201ENST00000398631 DERL1Q9BUN8 251 aa13.14□□□□□ -0.31
PCDHA12-201ENST00000398631 LINC01559Q495D7 138 aa13.14□□□□□ -0.31
PCDHA12-201ENST00000398631 Q6ZR03 302 aa13.14□□□□□ -0.31
PCDHA12-201ENST00000398631 NCOR1P1Q9H4R4 102 aa13.13□□□□□ -0.31
PCDHA12-201ENST00000398631 LY96Q9Y6Y9 160 aa13.13□□□□□ -0.31
PCDHA12-201ENST00000398631 PSG3Q16557 428 aa13.13□□□□□ -0.31
PCDHA12-201ENST00000398631 DEFB121Q5J5C9 76 aa13.13□□□□□ -0.31
PCDHA12-201ENST00000398631 MALRD1Q5VYJ5 2156 aa13.13□□□□□ -0.31
PCDHA12-201ENST00000398631 IGHV1-69DA0A0B4J2H0 117 aa13.13□□□□□ -0.31
PCDHA12-201ENST00000398631 IGKV1-6A0A0C4DH72 117 aa13.13□□□□□ -0.31
PCDHA12-201ENST00000398631 SLC25A20O43772 301 aa13.13□□□□□ -0.31
PCDHA12-201ENST00000398631 IGHV1-69P01742 117 aa13.13□□□□□ -0.31
PCDHA12-201ENST00000398631 SYNJ2BPP57105 145 aa13.13□□□□□ -0.31
PCDHA12-201ENST00000398631 MLANAQ16655 118 aa13.13□□□□□ -0.31
PCDHA12-201ENST00000398631 RUSC1-AS1Q66K80 236 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms