RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 PMS2P11Q13670 270 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 GNPNAT1Q96EK6 184 aaPredicted RBP8.33□□□□□ -1.08
PDGFD-202ENST00000393158 PXMP4Q9Y6I8 212 aa8.33□□□□□ -1.08
PDGFD-202ENST00000393158 F6UZH7 168 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 OR2J3O76001 311 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 RNASE1P07998 156 aaKnown RBP8.32□□□□□ -1.08
PDGFD-202ENST00000393158 SNCAP37840 140 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 C15orf32Q32M92 178 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 TMEM41BQ5BJD5 291 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 UNQ5815/PRO19632Q6UWF5 114 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 TGIF2-C20orf24A0A0A6YYL0 155 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 BORCS7-ASMTA0A0B4J1R7 106 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 CD5P06127 495 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 OR10J1P30954 320 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 SRSF2Q01130 221 aaKnown RBP8.32□□□□□ -1.08
PDGFD-202ENST00000393158 Q6ZRG5 221 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 NECAP1Q8NC96 275 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 STXBP6Q8NFX7 210 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 SEC11CQ9BY50 192 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 DNHD1Q96M86 4753 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 TEX38Q6PEX7 206 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 SLC25A2Q9BXI2 301 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 ENY2Q9NPA8 101 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 SLC39A9Q9NUM3 307 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 MRPL27Q9P0M9 148 aaKnown RBP8.32□□□□□ -1.08
PDGFD-202ENST00000393158 PITPNC1Q9UKF7 332 aa8.32□□□□□ -1.08
PDGFD-202ENST00000393158 FAM181BA6NEQ2 426 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 HIST1H2BKO60814 126 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 ACTL6BO94805 426 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 HIST1H2BJP06899 126 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 OR5G3P0C626 314 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 HIST1H2BOP23527 126 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 HIST1H2BBP33778 126 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 HIST1H2BDP58876 126 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 HIST1H2BCP62807 126 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 RHEBQ15382 184 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 HIST2H2BEQ16778 126 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.31□□□□□ -1.08
PDGFD-202ENST00000393158 CYP2G1PQ6ZSU1 146 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 C18orf65Q6ZTR6 163 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 ZNF491Q8N8L2 437 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 HIST1H2BHQ93079 126 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 HIST1H2BNQ99877 126 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 HIST1H2BMQ99879 126 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 CORTO00230 105 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 TRGC1P0CF51 173 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 PSG1P11464 419 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 CD99P14209 185 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 RHOGP84095 191 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 SLC35E3Q7Z769 313 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 VN1R17PQ8TDU5 208 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 GATAD1Q8WUU5 269 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 CDKN1BP46527 198 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 ELLP55199 621 aaPredicted RBP8.31□□□□□ -1.08
PDGFD-202ENST00000393158 SCGB2A2Q13296 93 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 ODF1Q14990 250 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 TIGITQ495A1 244 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 FFAR4Q5NUL3 377 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 DPPA3Q6W0C5 159 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 ZNF329Q86UD4 541 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 ZC2HC1AQ96GY0 325 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 ACY3Q96HD9 319 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 SLC35E1Q96K37 410 aa8.31□□□□□ -1.08
PDGFD-202ENST00000393158 TSPAN15O95858 294 aa8.3□□□□□ -1.08
PDGFD-202ENST00000393158 CLEC3BP05452 202 aa8.3□□□□□ -1.08
PDGFD-202ENST00000393158 GZMBP10144 247 aa8.3□□□□□ -1.08
PDGFD-202ENST00000393158 EDN2P20800 178 aa8.3□□□□□ -1.08
PDGFD-202ENST00000393158 HINT1P49773 126 aaPredicted RBP8.3□□□□□ -1.08
PDGFD-202ENST00000393158 TOMM20LQ6UXN7 152 aa8.3□□□□□ -1.08
PDGFD-202ENST00000393158 UHRF2Q96PU4 802 aa8.3□□□□□ -1.08
PDGFD-202ENST00000393158 HIST1H2BLQ99880 126 aa8.3□□□□□ -1.08
PDGFD-202ENST00000393158 FBXL7Q9UJT9 491 aa8.3□□□□□ -1.08
PDGFD-202ENST00000393158 SHISA2Q6UWI4 295 aa8.3□□□□□ -1.08
PDGFD-202ENST00000393158 ADARB2-AS1A8MUL3 147 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 STAG3L2P0CL84 134 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 RAB9AP51151 201 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 SUB1P53999 127 aaKnown RBP eCLIP8.29□□□□□ -1.08
PDGFD-202ENST00000393158 C10orf91Q5T1B1 145 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 MIR17HGQ75NE6 70 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 RARRES2Q99969 163 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 CSTL1Q9H114 145 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 C16orf95Q9H693 158 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.29□□□□□ -1.08
PDGFD-202ENST00000393158 TRAV5A0A0B4J249 113 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 OR2T8A6NH00 312 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 H3BUA1 57 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 PF4V1P10720 104 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 SMAGPQ0VAQ4 97 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 HIST3H2BBQ8N257 126 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 MS4A10Q96PG2 267 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 TXN2Q99757 166 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 PPP5D1E7EU14 171 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 BMPR1BO00238 502 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 IFNA5P01569 189 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 FRZBQ92765 325 aa8.29□□□□□ -1.08
PDGFD-202ENST00000393158 HMGB3O15347 200 aaKnown RBP8.28□□□□□ -1.08
PDGFD-202ENST00000393158 TOMM40O96008 361 aa8.28□□□□□ -1.08
PDGFD-202ENST00000393158 UQCC3Q6UW78 93 aa8.28□□□□□ -1.08
PDGFD-202ENST00000393158 ZNF709Q8N972 641 aa8.28□□□□□ -1.08
PDGFD-202ENST00000393158 OR10G4Q8NGN3 311 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms