RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SVIPQ8NHG7 77 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 LINC00477Q96M19 166 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 SLC25A39Q9BZJ4 359 aaPredicted RBP6.45□□□□□ -1.38
CKAP2-203ENST00000378037 GGTLC3B5MD39 225 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 SNAI2O43623 268 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 HOXB4P17483 251 aaPredicted RBP6.45□□□□□ -1.38
CKAP2-203ENST00000378037 RIPPLY3P57055 190 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 ERCC8Q13216 396 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 ELOBQ15370 118 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 RPEL1Q2QD12 228 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 FAM74A4Q5TZK3 123 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 DPPA3Q6W0C5 159 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 FAM169BQ8N8A8 192 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 VN1R17PQ8TDU5 208 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 F6UB75 175 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 AP4M1O00189 453 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 NPPCP23582 126 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 PRTN3P24158 256 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 CFHR2P36980 270 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 RPL29P47914 159 aaKnown RBP6.44□□□□□ -1.38
CKAP2-203ENST00000378037 PIP4P2Q8N4L2 257 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 C5orf17Q8NAS9 161 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 PACRGQ96M98 296 aaPredicted RBP6.44□□□□□ -1.38
CKAP2-203ENST00000378037 CHRDL1Q9BU40 450 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 BET1LQ9NYM9 111 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 PDE6DO43924 150 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 PCP4P48539 62 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 MAJINQ3KP22 176 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 C1orf122Q6ZSJ8 110 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 TMEM167AQ8TBQ9 72 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 CACNG8Q8WXS5 425 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 TMEM208Q9BTX3 173 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 NDUFA4L2Q9NRX3 87 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 CARHSP1Q9Y2V2 147 aaKnown RBP6.44□□□□□ -1.38
CKAP2-203ENST00000378037 TCRBV4S1A1TA0A5B7 111 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 M0R381 172 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 OVOL3O00110 214 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 MPDU1O75352 247 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 Q6ZS46 218 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 TMEM256Q8N2U0 113 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 TCTEX1D1Q8N7M0 179 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 ST6GALNAC6Q969X2 333 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 TUBA4BQ9H853 241 aa6.44□□□□□ -1.38
CKAP2-203ENST00000378037 C9JCJ5 164 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 PEX7O00628 323 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 ZNF688P0C7X2 276 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 STAG3L2P0CL84 134 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 STAG3L3P0CL85 134 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 COMPP49747 757 aaPredicted RBP6.43□□□□□ -1.38
CKAP2-203ENST00000378037 ZNF833PQ6ZTB9 187 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 LINC01551Q86U37 167 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 HIGD1CA8MV81 97 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 GCGP01275 180 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 MGPP08493 103 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 CDPF1Q6NVV7 123 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.43□□□□□ -1.38
CKAP2-203ENST00000378037 TRBV20OR9-2A0A075B6H5 130 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 IGLC7A0M8Q6 106 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 HIST1H2BKO60814 126 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 TRBV12-3P01733 135 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 HIST1H2BJP06899 126 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 HIST1H2BOP23527 126 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 HIST1H2BBP33778 126 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 EMP1P54849 157 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 HIST1H2BDP58876 126 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 HIST1H2BCP62807 126 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 ATP5G2Q06055 141 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 HIST2H2BEQ16778 126 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.43□□□□□ -1.38
CKAP2-203ENST00000378037 ERASQ7Z444 233 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 SIGLECL1Q8N7X8 197 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 TEX45Q8NA69 505 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 HIST1H2BHQ93079 126 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 MARVELD3Q96A59 401 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 C18orf15Q96N68 181 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 HIST1H2BNQ99877 126 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 HIST1H2BMQ99879 126 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 MRPL18Q9H0U6 180 aaKnown RBP6.43□□□□□ -1.38
CKAP2-203ENST00000378037 LSM4Q9Y4Z0 139 aaKnown RBP6.43□□□□□ -1.38
CKAP2-203ENST00000378037 ARL2-SNX15V9GYD0 113 aa6.43□□□□□ -1.38
CKAP2-203ENST00000378037 CXorf65A6NEN9 183 aa6.42□□□□□ -1.38
CKAP2-203ENST00000378037 HLA-DRB1P01911 266 aa6.42□□□□□ -1.38
CKAP2-203ENST00000378037 SRSF7Q16629 238 aaKnown RBP eCLIP6.42□□□□□ -1.38
CKAP2-203ENST00000378037 SMR3AQ99954 134 aa6.42□□□□□ -1.38
CKAP2-203ENST00000378037 F11RQ9Y624 299 aaKnown RBP6.42□□□□□ -1.38
CKAP2-203ENST00000378037 A0A1B0GW64 132 aa6.42□□□□□ -1.38
CKAP2-203ENST00000378037 A0A1B0GWJ7 208 aa6.42□□□□□ -1.38
CKAP2-203ENST00000378037 NCR2O95944 276 aa6.42□□□□□ -1.38
CKAP2-203ENST00000378037 MSMBP08118 114 aa6.42□□□□□ -1.38
CKAP2-203ENST00000378037 TWIST1Q15672 202 aa6.42□□□□□ -1.38
CKAP2-203ENST00000378037 TM4SF20Q53R12 229 aa6.42□□□□□ -1.38
CKAP2-203ENST00000378037 DDB2Q92466 427 aa6.42□□□□□ -1.38
CKAP2-203ENST00000378037 PNRC1Q12796 327 aaPredicted RBP6.42□□□□□ -1.38
CKAP2-203ENST00000378037 FAM71F2Q6NXP2 309 aa6.42□□□□□ -1.38
CKAP2-203ENST00000378037 ZNF841Q6ZN19 808 aa6.42□□□□□ -1.38
CKAP2-203ENST00000378037 OR8A1Q8NGG7 326 aa6.42□□□□□ -1.38
CKAP2-203ENST00000378037 NBPF19A0A087WUL8 3843 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 CENPVL3A0A0U1RRI6 287 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 SMKR1H3BMG3 65 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 IGHV2-5P01817 119 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms