RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 PAX9P55771 341 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 MST1LQ2TV78 715 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 NCOR1P1Q9H4R4 102 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 TRAV8-1A0A0A6YYK1 113 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 ATP5L2Q7Z4Y8 100 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 OR5AN1Q8NGI8 311 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 WFDC12Q8WWY7 111 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 EP400Q96L91 3159 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 TRGV2A0A075B6R0 118 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 OR10J3Q5JRS4 329 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 PSMG4Q5JS54 123 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 GFI1BQ5VTD9 330 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 NBL1P41271 181 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 FAM90A2PQ658T7 463 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 TTC9CQ8N5M4 171 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 TMEM14BQ9NUH8 114 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 F2Z2F3 143 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 ADCYAP1P18509 176 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 EMP1P54849 157 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 STHQ8IWL8 128 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 BEND2Q8NDZ0 799 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 FREM1Q5H8C1 2179 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 A0A1B0GV90 55 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 C9JQL5 133 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 LOXP28300 417 aaPredicted RBP11.04□□□□□ -0.64
C9orf47-203ENST00000375851 C17orf58Q2M2W7 97 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 ZNF329Q86UD4 541 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 HBDP02042 147 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 NDPQ00604 133 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 ZNF562Q6V9R5 426 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 JMJD8Q96S16 334 aa11.04□□□□□ -0.64
C9orf47-203ENST00000375851 NXT2Q9NPJ8 142 aaKnown RBP11.04□□□□□ -0.64
C9orf47-203ENST00000375851 NIT1Q86X76 327 aa11.03□□□□□ -0.64
C9orf47-203ENST00000375851 HIST3H2BBQ8N257 126 aa11.03□□□□□ -0.64
C9orf47-203ENST00000375851 TRBV7-1A0A0A6YYK4 115 aa11.03□□□□□ -0.64
C9orf47-203ENST00000375851 PRSS33Q8NF86 280 aa11.03□□□□□ -0.64
C9orf47-203ENST00000375851 ST20Q9HBF5 79 aa11.03□□□□□ -0.64
C9orf47-203ENST00000375851 LY96Q9Y6Y9 160 aa11.03□□□□□ -0.64
C9orf47-203ENST00000375851 PIEZO1Q92508 2521 aa11.03□□□□□ -0.64
C9orf47-203ENST00000375851 PLP1P60201 277 aa11.02□□□□□ -0.64
C9orf47-203ENST00000375851 TMEM190Q8WZ59 177 aa11.02□□□□□ -0.64
C9orf47-203ENST00000375851 Q8TAT8 98 aa11.02□□□□□ -0.65
C9orf47-203ENST00000375851 LINC00587B1AMM8 73 aa11.02□□□□□ -0.65
C9orf47-203ENST00000375851 ZNF688P0C7X2 276 aa11.02□□□□□ -0.65
C9orf47-203ENST00000375851 TMEM101Q96IK0 257 aa11.02□□□□□ -0.65
C9orf47-203ENST00000375851 C15orf65H3BRN8 121 aa11.02□□□□□ -0.65
C9orf47-203ENST00000375851 CACNG7P62955 275 aa11.02□□□□□ -0.65
C9orf47-203ENST00000375851 SMIM12Q96EX1 92 aa11.02□□□□□ -0.65
C9orf47-203ENST00000375851 SRSF8Q9BRL6 282 aaKnown RBP11.02□□□□□ -0.65
C9orf47-203ENST00000375851 MMP23AO75900 390 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 AMBPP02760 352 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 EVI2AP22794 236 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 ZNF138P52744 262 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 C9orf139Q6ZV77 190 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 NDUFA3O95167 84 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 PRR31Q5SQ13 230 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 LINC00479Q96M42 142 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 NDUFA4L2Q9NRX3 87 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 TOMM40O96008 361 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 SMIM13P0DJ93 91 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 CNTFRP26992 372 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 SRSF1Q07955 248 aaKnown RBP eCLIP11.01□□□□□ -0.65
C9orf47-203ENST00000375851 TEX36Q5VZQ5 186 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 IGFL4Q6B9Z1 124 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 MRAP2Q96G30 205 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 SLC25A16P16260 332 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 ZNF134P52741 427 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 LCN12Q6JVE5 192 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 LYPD1Q8N2G4 141 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 JKAMPQ9P055 326 aa11.01□□□□□ -0.65
C9orf47-203ENST00000375851 UBE2E1P51965 193 aa11□□□□□ -0.65
C9orf47-203ENST00000375851 USMG5Q96IX5 58 aa11□□□□□ -0.65
C9orf47-203ENST00000375851 PLXNB3Q9ULL4 1909 aa11□□□□□ -0.65
C9orf47-203ENST00000375851 LYZL1Q6UWQ5 148 aa11□□□□□ -0.65
C9orf47-203ENST00000375851 ZNF833PQ6ZTB9 187 aa11□□□□□ -0.65
C9orf47-203ENST00000375851 Q8NFD4 153 aa11□□□□□ -0.65
C9orf47-203ENST00000375851 COPS9Q8WXC6 57 aa11□□□□□ -0.65
C9orf47-203ENST00000375851 OTOGLQ3ZCN5 2332 aa11□□□□□ -0.65
C9orf47-203ENST00000375851 RNF166Q96A37 237 aaPredicted RBP11□□□□□ -0.65
C9orf47-203ENST00000375851 C2orf88Q9BSF0 95 aa11□□□□□ -0.65
C9orf47-203ENST00000375851 BEX4Q9NWD9 120 aaPredicted RBP11□□□□□ -0.65
C9orf47-203ENST00000375851 NDUFAF3Q9BU61 184 aa11□□□□□ -0.65
C9orf47-203ENST00000375851 PEF1Q9UBV8 284 aaKnown RBP11□□□□□ -0.65
C9orf47-203ENST00000375851 SONP18583 2426 aaKnown RBP10.99□□□□□ -0.65
C9orf47-203ENST00000375851 TRAV9-2A0A087WT02 112 aa10.99□□□□□ -0.65
C9orf47-203ENST00000375851 K7EM74 188 aa10.99□□□□□ -0.65
C9orf47-203ENST00000375851 NUP35Q8NFH5 326 aa10.99□□□□□ -0.65
C9orf47-203ENST00000375851 CHCHD1Q96BP2 118 aaKnown RBP10.99□□□□□ -0.65
C9orf47-203ENST00000375851 SRRM4A7MD48 611 aaKnown RBP10.99□□□□□ -0.65
C9orf47-203ENST00000375851 PIP4P2Q8N4L2 257 aa10.99□□□□□ -0.65
C9orf47-203ENST00000375851 CYSLTR1Q9Y271 337 aa10.99□□□□□ -0.65
C9orf47-203ENST00000375851 KIF26AQ9ULI4 1882 aaPredicted RBP10.99□□□□□ -0.65
C9orf47-203ENST00000375851 NDUFS8O00217 210 aa10.99□□□□□ -0.65
C9orf47-203ENST00000375851 PSG3Q16557 428 aa10.99□□□□□ -0.65
C9orf47-203ENST00000375851 TMEM256Q8N2U0 113 aa10.99□□□□□ -0.65
C9orf47-203ENST00000375851 IFI27L1Q96BM0 104 aa10.99□□□□□ -0.65
C9orf47-203ENST00000375851 SHANK2-AS3Q9BTD1 123 aa10.99□□□□□ -0.65
C9orf47-203ENST00000375851 VCX2Q9H322 139 aa10.99□□□□□ -0.65
C9orf47-203ENST00000375851 NCR2O95944 276 aa10.98□□□□□ -0.65
C9orf47-203ENST00000375851 TDGF1P13385 188 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms