RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SLC25A33Q9BSK2 321 aa7.14□□□□□ -1.27
ATG4A-203ENST00000372232 TPPP3Q9BW30 176 aa7.14□□□□□ -1.27
ATG4A-203ENST00000372232 WDR83OSQ9Y284 106 aa7.14□□□□□ -1.27
ATG4A-203ENST00000372232 PRRC2CQ9Y520 2896 aaKnown RBP7.14□□□□□ -1.27
ATG4A-203ENST00000372232 LOC400499M0QZD8 3231 aa7.14□□□□□ -1.27
ATG4A-203ENST00000372232 MED12LQ86YW9 2145 aa7.14□□□□□ -1.27
ATG4A-203ENST00000372232 TEX50A0A1B0GTY4 177 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 A0A1B0GXF2 115 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 SMIM9A6NGZ8 99 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 FNDC10F2Z333 226 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 HOXA3O43365 443 aaPredicted RBP7.13□□□□□ -1.27
ATG4A-203ENST00000372232 FCN3O75636 299 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 IGLV2-8P01709 118 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 MSMPQ1L6U9 139 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 TMEM78Q5T7P6 136 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 ATP5L2Q7Z4Y8 100 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 TMEM178AQ8NBL3 297 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 HIGD1BQ9P298 99 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 TMEM213A2RRL7 107 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 SCGB2A1O75556 95 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 CEACAM4O75871 244 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 SLC25A5P05141 298 aaKnown RBP7.13□□□□□ -1.27
ATG4A-203ENST00000372232 MKXQ8IYA7 352 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 MAP1LC3AQ9H492 121 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 FAM30AQ9NZY2 134 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 ZFHX4Q86UP3 3567 aa7.13□□□□□ -1.27
ATG4A-203ENST00000372232 K7ERJ3 54 aa7.12□□□□□ -1.27
ATG4A-203ENST00000372232 NFE4Q86UQ8 179 aa7.12□□□□□ -1.27
ATG4A-203ENST00000372232 NUP35Q8NFH5 326 aa7.12□□□□□ -1.27
ATG4A-203ENST00000372232 OR51H1Q8NH63 302 aa7.12□□□□□ -1.27
ATG4A-203ENST00000372232 DNAJC30Q96LL9 226 aa7.12□□□□□ -1.27
ATG4A-203ENST00000372232 IDI2-AS1Q9NZ38 188 aa7.12□□□□□ -1.27
ATG4A-203ENST00000372232 IL36RNQ9UBH0 155 aa7.12□□□□□ -1.27
ATG4A-203ENST00000372232 SCTP09683 121 aa7.12□□□□□ -1.27
ATG4A-203ENST00000372232 GCSHP23434 173 aa7.12□□□□□ -1.27
ATG4A-203ENST00000372232 FAM231DQ6ZW35 169 aa7.12□□□□□ -1.27
ATG4A-203ENST00000372232 MDP1Q86V88 176 aa7.12□□□□□ -1.27
ATG4A-203ENST00000372232 ZNF747Q9BV97 191 aa7.12□□□□□ -1.27
ATG4A-203ENST00000372232 URB1O60287 2271 aaKnown RBP7.11□□□□□ -1.27
ATG4A-203ENST00000372232 MPDU1O75352 247 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 NCR2O95944 276 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 RBP4P02753 201 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 EDDM3BP56851 147 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 ANXA2RQ3ZCQ2 193 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 DEFB124Q8NES8 71 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 FAM168AQ92567 244 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 IGF2BP2-AS1Q96M15 143 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 PIMREGQ9BSJ6 248 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 SPENQ96T58 3664 aaKnown RBP7.11□□□□□ -1.27
ATG4A-203ENST00000372232 PTPRZ1P23471 2315 aaPredicted RBP7.11□□□□□ -1.27
ATG4A-203ENST00000372232 CFAP47Q6ZTR5 3102 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 TRAV5A0A0B4J249 113 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 IGKV1-6A0A0C4DH72 117 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 IFITM1P13164 125 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 CCL11P51671 97 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 PRR30Q53SZ7 412 aaPredicted RBP7.11□□□□□ -1.27
ATG4A-203ENST00000372232 CFAP126Q5VTH2 177 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 Q6Q795 121 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 Q6ZR03 302 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 PPDPFLQ8WWR9 84 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 RPEQ96AT9 228 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 RAB9BQ9NP90 201 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 DMXL1Q9Y485 3027 aa7.11□□□□□ -1.27
ATG4A-203ENST00000372232 DOCK7Q96N67 2140 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 KIR2DS1A0A191URI9 304 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 TCRBV4S1A1TA0A5B7 111 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 HSPB6O14558 160 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 IGHG3P01860 377 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 SPINK2P20155 84 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 CA6P23280 308 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 ERVK11-1P61568 191 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 KIR2DS1Q14954 304 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 TBC1D28Q2M2D7 210 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 LGALS9BQ3B8N2 356 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 LGALS9CQ6DKI2 356 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 AMTNQ6UX39 209 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 LINC00596Q86U02 117 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 FDCSPQ8NFU4 85 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 ZNF488Q96MN9 340 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 A8MWL6 223 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 TMEM262E9PQX1 116 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 IGHV1-2P23083 117 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 PPIFP30405 207 aaKnown RBP7.1□□□□□ -1.27
ATG4A-203ENST00000372232 GAGE2BQ13066 116 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 POU2AF1Q16633 256 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 GAGE2EQ4V326 116 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 HIST2H2BCQ6DN03 193 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 HIST2H2BDQ6DRA6 164 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 OR9G1Q8NH87 305 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 NHP2Q9NX24 153 aaKnown RBP7.1□□□□□ -1.27
ATG4A-203ENST00000372232 GAGE2DQ9UEU5 116 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 CEP250Q9BV73 2442 aa7.1□□□□□ -1.27
ATG4A-203ENST00000372232 TRAV24A0A0B4J272 114 aa7.09□□□□□ -1.27
ATG4A-203ENST00000372232 MGST3O14880 152 aa7.09□□□□□ -1.27
ATG4A-203ENST00000372232 WISP2O76076 250 aa7.09□□□□□ -1.27
ATG4A-203ENST00000372232 EVI2AP22794 236 aa7.09□□□□□ -1.27
ATG4A-203ENST00000372232 FOXA3P55318 350 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-203ENST00000372232 MEIG1Q5JSS6 88 aa7.09□□□□□ -1.27
ATG4A-203ENST00000372232 PCSK4Q6UW60 755 aa7.09□□□□□ -1.27
ATG4A-203ENST00000372232 IGFL2Q6UWQ7 119 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms